Strain Fitness in Pseudomonas simiae WCS417 around PS417_28135

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
6,070,671	+		PS417_28130	0.59	-1.1
6,071,255	+				-0.0
6,071,469	+				-0.9
6,071,470	-				-0.8
6,071,470	-				-0.5
6,071,470	-				+0.3
6,071,470	-				+0.3
6,071,470	-				-0.6
6,071,472	-				-0.8
6,071,472	-				-0.6
6,071,539	+				-0.0
6,071,688	-				+1.2
6,071,781	+				-0.4
6,071,986	+		PS417_28135	0.23	-0.6
6,072,013	+		PS417_28135	0.25	-1.7
6,072,013	+		PS417_28135	0.25	-2.7
6,072,031	+		PS417_28135	0.26	-0.6
6,072,034	+		PS417_28135	0.27	-1.1
6,072,034	+		PS417_28135	0.27	-0.3
6,072,034	+		PS417_28135	0.27	-0.5
6,072,034	+		PS417_28135	0.27	-1.2
6,072,035	-		PS417_28135	0.27	-1.7
6,072,035	-		PS417_28135	0.27	-1.2
6,072,178	+		PS417_28135	0.37	+1.2
6,072,179	-		PS417_28135	0.37	-0.3
6,072,179	-		PS417_28135	0.37	+0.1
6,072,283	+		PS417_28135	0.44	-0.0
6,072,283	+		PS417_28135	0.44	-1.3
6,072,284	-		PS417_28135	0.44	-0.3
6,072,284	-		PS417_28135	0.44	-1.9
6,072,301	+		PS417_28135	0.45	-0.6
6,072,302	-		PS417_28135	0.45	+0.0
6,072,593	-		PS417_28135	0.65	+0.6
6,072,718	+		PS417_28135	0.74	+0.3
6,072,719	-		PS417_28135	0.74	-0.7
6,072,724	+		PS417_28135	0.74	+0.8
6,072,725	-		PS417_28135	0.74	-0.0
6,072,725	-		PS417_28135	0.74	-1.7
6,072,727	+		PS417_28135	0.74	-1.2
6,072,727	+		PS417_28135	0.74	-1.0
6,073,099	+				+0.0
6,073,099	+				+2.7
6,073,100	-				-0.1
6,073,100	-				-0.8
6,073,103	+				-1.0
6,073,103	+				-0.4
6,073,103	+				-0.9
6,073,103	+				-2.5
6,073,104	-				+0.3
6,073,104	-				+0.3
6,073,104	-				-0.6
6,073,169	-				+1.3
6,073,169	-				-0.4
6,073,365	+		PS417_28140	0.20	-0.5
6,073,936	+		PS417_28140	0.78	+1.4
6,073,990	-		PS417_28140	0.84	+0.0