Strain Fitness in Pseudomonas simiae WCS417 around PS417_28120
Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X |
|---|---|---|---|---|---|
| remove | |||||
| 6,068,497 | - | -0.3 | |||
| 6,068,530 | - | -0.9 | |||
| 6,068,537 | - | +0.9 | |||
| 6,068,539 | + | -2.3 | |||
| 6,068,539 | + | -0.7 | |||
| 6,068,539 | + | -3.0 | |||
| 6,068,540 | - | +2.1 | |||
| 6,068,548 | + | +0.4 | |||
| 6,068,549 | - | +0.5 | |||
| 6,068,599 | - | -0.2 | |||
| 6,068,645 | - | +0.9 | |||
| 6,068,693 | - | -0.7 |
Or see this region's nucleotide sequence