Strain Fitness in Pseudomonas simiae WCS417 around PS417_26010

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
5,618,761	-				+0.0
5,618,848	+		PS417_26005	0.25	+0.0
5,618,848	+		PS417_26005	0.25	-1.0
5,618,848	+		PS417_26005	0.25	+0.1
5,618,848	+		PS417_26005	0.25	+0.0
5,618,849	-		PS417_26005	0.25	+0.5
5,618,849	-		PS417_26005	0.25	-0.2
5,618,849	-		PS417_26005	0.25	-2.9
5,618,849	-		PS417_26005	0.25	+1.0
5,619,090	-		PS417_26005	0.48	+1.3
5,619,090	-				+1.6
5,619,090	-		PS417_26005	0.48	+0.1
5,619,090	-		PS417_26005	0.48	+0.0
5,619,090	-		PS417_26005	0.48	+0.4
5,619,116	+		PS417_26005	0.50	+0.7
5,619,159	+		PS417_26005	0.54	-0.7
5,619,160	-		PS417_26005	0.54	+0.6
5,619,160	-		PS417_26005	0.54	+0.2
5,619,176	+		PS417_26005	0.56	-1.0
5,619,176	+		PS417_26005	0.56	+1.6
5,619,176	+		PS417_26005	0.56	+1.5
5,619,176	+		PS417_26005	0.56	+0.2
5,619,177	-		PS417_26005	0.56	-0.9
5,619,177	-		PS417_26005	0.56	+0.6
5,619,177	-		PS417_26005	0.56	-0.0
5,619,179	+		PS417_26005	0.56	+0.6
5,619,290	+		PS417_26005	0.67	-1.1
5,619,290	+		PS417_26005	0.67	-0.1
5,619,291	-		PS417_26005	0.67	+1.5
5,619,291	-				-0.6
5,619,291	-		PS417_26005	0.67	-0.1
5,619,291	-		PS417_26005	0.67	+0.3
5,619,428	+		PS417_26005	0.80	-0.7
5,619,429	-		PS417_26005	0.80	-0.6
5,619,658	+				+0.0
5,619,658	+				-0.7
5,619,719	+				+0.1
5,619,720	-				+1.5
5,619,720	-				+0.6
5,619,978	+		PS417_26010	0.33	+1.5
5,619,979	-		PS417_26010	0.33	+1.6
5,619,979	-		PS417_26010	0.33	+0.5
5,620,162	-		PS417_26010	0.58	-0.3
5,620,162	-		PS417_26010	0.58	+5.8
5,620,205	-		PS417_26010	0.64	+0.2
5,620,363	+		PS417_26010	0.85	+0.0
5,620,363	+		PS417_26010	0.85	+0.1
5,620,438	-				-0.5
5,620,438	-				+0.3
5,620,524	+				-0.1
5,620,525	-				+0.2
5,620,617	+		PS417_26015	0.11	-1.3
5,620,617	+		PS417_26015	0.11	-0.2
5,620,618	-		PS417_26015	0.11	-0.2
5,620,618	-		PS417_26015	0.11	-0.5
5,620,618	-		PS417_26015	0.11	-1.2
5,620,652	-		PS417_26015	0.16	-0.4
5,620,652	-		PS417_26015	0.16	+1.4
5,620,799	+		PS417_26015	0.35	-0.8
5,620,799	+		PS417_26015	0.35	-1.3
5,620,800	-		PS417_26015	0.35	-0.3
5,621,007	-		PS417_26015	0.62	-0.5
5,621,081	+		PS417_26015	0.72	+0.3
5,621,186	+		PS417_26015	0.86	-0.4
5,621,187	-		PS417_26015	0.86	-0.2
5,621,238	+				+0.3
5,621,305	+				+0.7
5,621,309	+				+0.5
5,621,309	+				-2.1
5,621,310	-				+0.4
5,621,381	+				-1.4
5,621,384	+				+0.5
5,621,384	+				-0.1
5,621,385	-				+0.6