Strain Fitness in Pseudomonas simiae WCS417 around PS417_25395

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
5,498,873	-		PS417_25390	0.41	-0.1
5,499,013	-		PS417_25390	0.51	+0.8
5,499,027	+		PS417_25390	0.52	-1.0
5,499,028	-		PS417_25390	0.52	+0.6
5,499,724	+				+1.9
5,499,724	+				-0.6
5,499,724	+				+0.9
5,499,748	+				-0.6
5,499,750	+				-0.7
5,499,750	+				-0.2
5,499,750	+				-0.4
5,499,750	+				+0.4
5,499,751	-				+0.3
5,499,751	-				+0.9
5,499,780	+				-0.5
5,499,780	+				+0.2
5,499,781	-				+1.0
5,499,781	-				+0.3
5,499,781	-				+0.8
5,499,781	-				+0.6
5,499,809	-				+0.7
5,499,810	+				+0.6
5,499,831	+				-0.1
5,499,832	-				+0.7
5,499,833	+				-0.2
5,499,833	+				+0.0
5,499,834	-				+0.3
5,499,834	-				-1.2
5,499,844	+				+0.2
5,499,845	-				+0.7
5,499,849	-				+1.3
5,499,898	-				+0.8
5,500,007	-				+0.6
5,500,189	+		PS417_25395	0.11	-0.8
5,500,190	-		PS417_25395	0.11	+0.2
5,500,190	-		PS417_25395	0.11	+0.9
5,500,204	+		PS417_25395	0.12	+0.6
5,500,205	-		PS417_25395	0.12	+2.7
5,500,205	-		PS417_25395	0.12	+0.1
5,500,218	+		PS417_25395	0.12	+0.2
5,500,394	+		PS417_25395	0.18	+1.0
5,500,394	+		PS417_25395	0.18	-1.1
5,500,420	+		PS417_25395	0.19	+0.0
5,500,420	+		PS417_25395	0.19	-1.9
5,500,420	+		PS417_25395	0.19	+0.4
5,500,813	+		PS417_25395	0.33	+0.9
5,500,816	+		PS417_25395	0.33	+0.8
5,500,817	-		PS417_25395	0.33	-0.3
5,500,817	-		PS417_25395	0.33	+0.2
5,500,817	-				-0.1
5,500,869	-		PS417_25395	0.35	+1.2
5,500,869	-		PS417_25395	0.35	-2.1
5,500,945	+		PS417_25395	0.38	+0.7
5,500,996	-		PS417_25395	0.40	-0.8
5,501,192	-		PS417_25395	0.47	+0.8
5,501,201	+		PS417_25395	0.47	+0.1
5,501,296	+		PS417_25395	0.50	+0.0
5,501,297	-		PS417_25395	0.50	-0.9
5,501,297	-		PS417_25395	0.50	+0.9
5,501,297	-		PS417_25395	0.50	-0.1
5,501,395	+		PS417_25395	0.54	+0.8
5,501,395	+		PS417_25395	0.54	+0.0
5,501,395	+		PS417_25395	0.54	+1.1
5,501,395	+		PS417_25395	0.54	+1.4
5,501,396	-		PS417_25395	0.54	+0.1
5,501,396	-		PS417_25395	0.54	+0.8
5,501,455	-		PS417_25395	0.56	+0.9
5,501,534	-		PS417_25395	0.59	+1.3
5,501,534	-		PS417_25395	0.59	+0.5
5,501,577	+		PS417_25395	0.60	+0.0
5,501,639	-		PS417_25395	0.62	+0.6
5,501,639	-		PS417_25395	0.62	-0.3
5,501,639	-		PS417_25395	0.62	-0.6
5,501,816	+		PS417_25395	0.69	-0.6
5,501,816	+		PS417_25395	0.69	-1.2
5,501,816	+		PS417_25395	0.69	+0.3
5,501,917	-		PS417_25395	0.72	-1.3
5,501,977	+		PS417_25395	0.74	-0.2
5,502,145	+		PS417_25395	0.80	-0.1
5,502,145	+		PS417_25395	0.80	-0.2
5,502,145	+		PS417_25395	0.80	-0.1
5,502,146	-		PS417_25395	0.80	+1.0
5,502,146	-		PS417_25395	0.80	+0.3
5,502,146	-		PS417_25395	0.80	+0.5
5,502,146	-		PS417_25395	0.80	+0.6
5,502,146	-		PS417_25395	0.80	-0.3
5,502,146	-		PS417_25395	0.80	-1.0
5,502,178	+		PS417_25395	0.81	+0.4
5,502,178	+		PS417_25395	0.81	+0.1
5,502,178	+		PS417_25395	0.81	-2.0
5,502,205	+		PS417_25395	0.82	+0.1
5,502,205	+		PS417_25395	0.82	-0.3
5,502,205	+		PS417_25395	0.82	+0.7
5,502,205	+		PS417_25395	0.82	+1.0
5,502,206	-		PS417_25395	0.82	-0.2
5,502,206	-		PS417_25395	0.82	-0.7
5,502,325	+		PS417_25395	0.87	-1.7
5,502,325	+		PS417_25395	0.87	+3.1
5,502,326	-		PS417_25395	0.87	+0.1
5,502,326	-		PS417_25395	0.87	+0.2
5,502,326	-		PS417_25395	0.87	+1.0
5,502,326	-		PS417_25395	0.87	+1.0
5,502,427	+				+0.2
5,502,428	-				+0.5
5,502,428	-				+1.0
5,502,428	-				-0.1
5,502,428	-				+0.4
5,502,428	-				+1.4
5,502,470	+				-0.7
5,502,471	-				-0.9
5,502,621	-				+0.1
5,502,668	-				+0.2
5,502,670	+				-0.9
5,502,670	+				+1.1
5,502,670	+				+2.2
5,502,671	-				+0.9
5,502,671	-				-1.4
5,502,792	-				-0.1
5,502,899	+		PS417_25400	0.27	-1.7
5,502,899	+		PS417_25400	0.27	-1.1
5,502,900	-		PS417_25400	0.28	-0.6
5,502,900	-		PS417_25400	0.28	+1.1
5,502,900	-		PS417_25400	0.28	+0.1
5,502,900	-		PS417_25400	0.28	+0.7
5,502,956	+		PS417_25400	0.40	-0.3
5,502,956	+		PS417_25400	0.40	-0.4
5,502,957	-		PS417_25400	0.40	-0.3
5,502,957	-		PS417_25400	0.40	-0.6
5,502,957	-		PS417_25400	0.40	+7.5
5,502,957	-		PS417_25400	0.40	+0.3
5,502,992	-		PS417_25400	0.47	-0.5
5,503,107	+		PS417_25400	0.72	+0.1
5,503,142	+		PS417_25400	0.80	-0.3
5,503,216	+				+1.0
5,503,217	-				+0.4
5,503,242	+				-0.3
5,503,243	-				-1.0
5,503,243	-				+1.1
5,503,394	-				-0.2
5,503,394	-				-1.8
5,503,453	+				-0.3
5,503,579	+		PS417_25405	0.13	+0.0
5,503,580	-		PS417_25405	0.13	+0.3
5,503,580	-		PS417_25405	0.13	-0.1
5,503,583	-		PS417_25405	0.13	-0.1
5,503,607	-		PS417_25405	0.15	+0.1
5,503,678	+		PS417_25405	0.20	-1.1
5,503,678	+		PS417_25405	0.20	-0.5
5,503,679	-		PS417_25405	0.20	+0.4
5,503,693	+		PS417_25405	0.21	-1.8
5,503,694	-		PS417_25405	0.21	-0.4