Strain Fitness in Pseudomonas simiae WCS417 around PS417_25305

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
5,479,068	+				+0.0
5,479,068	+				-1.3
5,479,068	+				-1.0
5,479,069	-				-0.8
5,479,069	-				-1.4
5,479,270	-		PS417_25305	0.16	+2.3
5,479,536	+		PS417_25305	0.37	+0.6
5,479,536	+		PS417_25305	0.37	-1.2
5,479,536	+		PS417_25305	0.37	-2.4
5,479,537	-		PS417_25305	0.37	+1.0
5,479,573	+		PS417_25305	0.40	-0.9
5,479,906	+		PS417_25305	0.66	-0.9
5,479,906	+		PS417_25305	0.66	+0.3
5,479,906	+		PS417_25305	0.66	-0.3
5,480,047	+		PS417_25305	0.78	-0.5
5,480,048	-		PS417_25305	0.78	-1.5
5,480,048	-		PS417_25305	0.78	-0.5
5,480,048	-		PS417_25305	0.78	+0.2
5,480,067	-		PS417_25305	0.79	+0.9
5,480,139	+		PS417_25305	0.85	-0.6
5,480,140	-		PS417_25305	0.85	-0.5
5,480,320	+				-1.5
5,480,321	-				-0.7
5,480,738	+		PS417_25310	0.77	-3.1
5,480,739	-		PS417_25310	0.77	+0.9
5,480,739	-		PS417_25310	0.77	+0.0
5,480,747	+		PS417_25310	0.79	-1.6
5,480,837	+				-0.1
5,480,837	+				-0.9
5,480,837	+				-0.2
5,480,837	+				-0.8
5,480,837	+				-1.1
5,480,838	-				-1.3
5,480,838	-				-0.3
5,480,838	-				-0.8
5,480,920	-				+1.3
5,481,007	+				-1.2
5,481,007	+				+0.0
5,481,174	+		PS417_25315	0.32	+0.4
5,481,175	-		PS417_25315	0.32	+0.2
5,481,319	-		PS417_25315	0.53	+0.1
5,481,321	+		PS417_25315	0.53	-0.8
5,481,322	-		PS417_25315	0.53	+0.2