Strain Fitness in Pseudomonas simiae WCS417 around PS417_25135

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
5,449,394	+				-1.5
5,449,394	+				+0.5
5,449,402	+				-0.2
5,449,402	+				+1.4
5,449,403	-				-3.3
5,449,412	+				-0.7
5,449,412	+				+0.3
5,449,413	-				-0.3
5,449,415	+				-0.4
5,449,415	+				+1.2
5,449,416	-				-0.7
5,449,561	+		PS417_25130	0.30	+2.1
5,449,561	+		PS417_25130	0.30	-0.6
5,449,623	-		PS417_25130	0.43	+0.1
5,449,623	-		PS417_25130	0.43	-1.0
5,449,623	-		PS417_25130	0.43	+1.0
5,449,625	+		PS417_25130	0.43	-0.1
5,449,625	+		PS417_25130	0.43	-0.9
5,449,625	+		PS417_25130	0.43	-0.9
5,449,626	-		PS417_25130	0.43	-0.0
5,449,626	-		PS417_25130	0.43	-1.0
5,449,626	-		PS417_25130	0.43	+2.2
5,449,626	-		PS417_25130	0.43	-2.4
5,449,639	+		PS417_25130	0.46	+0.7
5,449,640	-		PS417_25130	0.46	-0.4
5,449,806	+		PS417_25130	0.82	-0.5
5,449,808	+		PS417_25130	0.82	+1.8
5,449,809	-		PS417_25130	0.82	+1.3
5,449,809	-		PS417_25130	0.82	-0.7
5,449,809	-		PS417_25130	0.82	+0.1
5,449,816	+		PS417_25130	0.84	-1.3
5,449,816	+		PS417_25130	0.84	-0.5
5,449,817	-		PS417_25130	0.84	+1.3
5,449,859	+				+0.1
5,449,867	-				+1.3
5,449,960	+				-0.6
5,449,961	-				-0.6
5,449,970	+				-0.2
5,449,970	+				-0.1
5,449,970	+				+0.2
5,449,971	-				-2.2
5,449,984	-				-0.5
5,449,984	-				+0.5
5,450,039	+				-0.5
5,450,039	+				-0.0
5,450,040	-				+0.7
5,450,049	+				-2.2
5,450,050	-				-1.2
5,450,052	+				-0.9
5,450,053	-				-1.6
5,450,053	-				-1.7
5,450,086	+				+0.1
5,450,086	+				+0.2
5,450,087	-				-0.4
5,450,087	-				-0.1
5,450,087	-				-0.2
5,450,087	-				-1.3
5,450,087	-				-1.8
5,450,161	-				-1.0
5,450,162	+				+1.2
5,450,162	+				+0.1
5,450,162	+				-0.9
5,450,162	+				+0.4
5,450,163	-				-0.4
5,450,163	-				-0.3
5,450,163	-				-2.5
5,450,175	+				+0.2
5,450,181	+				+0.1
5,450,238	+				+1.4
5,450,238	+				-1.2
5,450,239	-				-0.6
5,450,239	-				-2.2
5,450,284	-				-2.3
5,450,398	+		PS417_25135	0.34	+0.0
5,450,398	+		PS417_25135	0.34	-1.8
5,450,399	-		PS417_25135	0.34	+1.7
5,450,454	+		PS417_25135	0.57	+0.0
5,450,493	+		PS417_25135	0.73	+4.0
5,450,581	+				-0.5
5,450,611	-				+0.4
5,450,611	-				-0.6
5,450,619	+				-0.3
5,450,622	-				+0.5
5,450,623	+				-1.2
5,450,646	+				-0.1
5,450,647	-				+0.3
5,450,687	+				-0.1
5,450,688	-				+0.3
5,450,688	-				+0.1
5,450,688	-				-0.0
5,450,688	-				+1.6
5,450,689	+				+0.5
5,450,689	+				+1.4
5,450,689	+				-0.3
5,450,689	+				+0.3
5,450,689	+				+0.6
5,450,690	-				+0.4
5,450,690	-				-0.1
5,450,690	-				-2.7
5,450,771	+				-0.4
5,450,798	+				-0.6
5,450,798	+				-1.3
5,450,799	-				-0.3
5,450,799	-				-1.3
5,450,799	-				-0.3
5,450,834	-				-0.7
5,450,885	-				+0.1
5,450,885	-				+1.2
5,450,987	-				+0.9
5,451,210	+				+0.9
5,451,211	-				-0.1
5,451,211	-				-0.3
5,451,282	-				-1.0
5,451,336	+				-1.2
5,451,336	+				+0.4
5,451,337	-				+0.4
5,451,363	+				+1.0
5,451,394	+				-0.3
5,451,394	+				+0.4
5,451,394	+				+0.1
5,451,394	+				-0.2
5,451,395	-				-1.2