Strain Fitness in Pseudomonas simiae WCS417 around PS417_23225

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
5,029,472	-				+0.7
5,029,486	-				+0.7
5,030,541	-		PS417_23225	0.20	+1.9
5,030,612	+		PS417_23225	0.33	+0.2
5,030,613	-		PS417_23225	0.33	-1.6
5,030,613	-		PS417_23225	0.33	-0.6
5,030,616	+		PS417_23225	0.34	+2.4
5,030,617	-		PS417_23225	0.34	+1.4
5,030,697	+		PS417_23225	0.48	-0.3
5,030,749	+		PS417_23225	0.58	+1.8
5,030,750	-		PS417_23225	0.58	+0.3
5,030,836	+		PS417_23225	0.74	+0.4
5,030,836	+		PS417_23225	0.74	+0.2
5,030,877	-		PS417_23225	0.82	+0.3
5,030,903	+		PS417_23225	0.86	-0.2
5,030,903	+		PS417_23225	0.86	-1.0
5,030,903	+		PS417_23225	0.86	+1.5
5,030,904	-		PS417_23225	0.87	+0.4
5,030,904	-		PS417_23225	0.87	-0.1
5,030,904	-		PS417_23225	0.87	+0.8
5,030,929	+				-0.4
5,030,930	-				-0.4
5,030,930	-				-0.2
5,031,144	+				-4.4
5,031,145	-				-1.1