Strain Fitness in Pseudomonas simiae WCS417 around PS417_21230

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
4,616,340	-				+0.1
4,616,417	+				-0.4
4,616,417	+				+0.0
4,616,423	-				+1.6
4,616,423	-				+1.2
4,616,558	-				+0.7
4,616,558	-				+0.5
4,616,711	+				-0.9
4,616,727	+				+2.5
4,616,728	-				+0.3
4,616,728	-				-1.3
4,616,728	-				-0.3
4,616,728	-				+2.4
4,616,800	+				-0.2
4,616,801	-				-0.3
4,616,801	-				-0.0
4,617,118	+		PS417_21230	0.21	-0.9
4,617,119	-		PS417_21230	0.21	-0.2
4,617,119	-		PS417_21230	0.21	-1.3
4,617,329	+		PS417_21230	0.47	-1.9
4,617,329	+		PS417_21230	0.47	-1.1
4,617,330	-		PS417_21230	0.48	-0.2
4,617,572	+		PS417_21230	0.78	-1.1
4,617,614	+		PS417_21230	0.83	-1.5
4,617,615	-		PS417_21230	0.83	-1.0
4,617,615	-				+2.1
4,617,615	-		PS417_21230	0.83	-1.8
4,617,716	+				-0.0
4,617,717	-				+0.9
4,617,749	+				-0.2
4,617,750	-				-0.5
4,617,833	-				-1.0
4,617,993	+		PS417_21235	0.14	+2.1
4,618,062	+		PS417_21235	0.22	+0.8
4,618,063	-		PS417_21235	0.22	-0.1
4,618,129	-		PS417_21235	0.30	-0.4
4,618,146	+		PS417_21235	0.33	+1.6
4,618,272	+		PS417_21235	0.48	-1.0
4,618,273	-		PS417_21235	0.48	-0.2
4,618,621	-				+0.5
4,618,621	-				+0.4
4,618,656	+				-0.1
4,618,656	+				-0.0
4,618,657	-				+0.1
4,618,709	+				+1.0
4,618,709	+				+2.4
4,618,709	+				-0.2
4,618,709	+				+0.0
4,618,709	+				-0.6
4,618,709	+				+0.3
4,618,710	-				+1.1
4,618,710	-				-0.6
4,618,710	-				-0.7