Strain Fitness in Pseudomonas simiae WCS417 around PS417_21185

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
4,606,609	-				-0.1
4,606,638	-				-1.9
4,606,648	+				-0.7
4,606,648	+				-1.0
4,606,648	+				-0.3
4,606,648	+				-0.2
4,606,648	+				+0.0
4,606,648	+				+0.2
4,606,648	+				-2.4
4,606,649	-				+0.4
4,606,649	-				-0.9
4,606,649	-				+1.0
4,606,649	-				-1.2
4,606,649	-				-2.2
4,606,708	+				+1.3
4,606,750	-				+0.7
4,606,751	+				+2.0
4,606,751	+				+0.3
4,606,797	-				-0.1
4,606,848	+				+0.9
4,606,863	+				-0.6
4,606,863	+				-0.3
4,606,932	+				+0.1
4,606,994	+				-0.0
4,607,009	+				-2.0
4,607,009	+				+2.2
4,607,009	+				+0.1
4,607,009	+				-0.5
4,607,010	-				-0.4
4,607,010	-				-0.5
4,607,010	-				-0.5
4,607,010	-				+0.6
4,607,014	-				-1.7
4,607,014	-				-0.0
4,607,014	-				+0.1
4,607,142	+		PS417_21180	0.53	-0.6
4,607,147	-		PS417_21180	0.54	-0.6
4,607,147	-		PS417_21180	0.54	-1.2
4,607,155	-		PS417_21180	0.57	-0.4
4,607,239	-		PS417_21180	0.89	-0.7
4,607,275	-				-0.3
4,607,289	+				+0.2
4,607,324	+				-1.0
4,607,381	+				-3.0
4,607,404	+				-0.5
4,607,405	-				-0.3
4,607,423	+				+1.6
4,607,425	+				+0.9
4,607,425	+				+0.2
4,607,426	-				-0.3
4,607,426	-				-0.3
4,607,426	-				-1.2
4,607,429	+				+0.1
4,607,429	+				-0.9
4,607,429	+				+0.1
4,607,429	+				-0.2
4,607,430	-				-0.7
4,607,430	-				+0.6
4,607,430	-				+1.3
4,607,890	-		PS417_21185	0.30	-0.1
4,608,480	+		PS417_21185	0.83	-0.9
4,608,480	+		PS417_21185	0.83	-0.8
4,608,481	-		PS417_21185	0.84	-1.0
4,608,610	+				+0.0
4,608,851	+				-0.1
4,609,255	+				-1.2
4,609,255	+				-0.2
4,609,255	+				-1.3
4,609,255	+				-1.1
4,609,255	+				-0.7
4,609,255	+				-0.2
4,609,255	+				+1.1
4,609,255	+				-1.9
4,609,255	+				+2.8
4,609,255	+				-2.9
4,609,256	-				-0.7
4,609,256	-				+0.4
4,609,256	-				-0.5
4,609,256	-				+0.0
4,609,257	+				-0.5
4,609,258	-				-1.2
4,609,340	+				-0.2
4,609,340	+				-0.7
4,609,341	-				-0.6
4,609,343	+				-0.7
4,609,343	+				-0.4
4,609,348	-				-0.5
4,609,348	-				+0.5
4,609,355	+				-0.7
4,609,356	-				+1.4
4,609,356	-				-0.5
4,609,367	+				-0.2
4,609,367	+				-1.4