Strain Fitness in Pseudomonas simiae WCS417 around PS417_21025

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
4,572,736	-				-0.2
4,572,812	+		PS417_21020	0.70	+1.4
4,572,816	+				-0.5
4,572,817	-		PS417_21020	0.70	+0.2
4,572,884	+		PS417_21020	0.73	-0.2
4,572,884	+		PS417_21020	0.73	+1.0
4,573,010	+		PS417_21020	0.78	-2.7
4,573,010	+		PS417_21020	0.78	+0.5
4,573,011	-		PS417_21020	0.78	+0.4
4,573,011	-		PS417_21020	0.78	-0.9
4,573,052	+		PS417_21020	0.80	-0.3
4,573,053	-				+0.9
4,573,091	+		PS417_21020	0.82	-0.2
4,573,091	+		PS417_21020	0.82	+0.6
4,573,092	-		PS417_21020	0.82	+0.5
4,573,432	+				-0.2
4,573,478	+				-0.6
4,573,478	+				-0.6
4,573,478	+				+1.2
4,573,479	-				+0.3
4,573,479	-				+0.5
4,573,479	-				-0.0
4,573,511	+				-0.6
4,573,511	+				+0.5
4,573,511	+				+1.9
4,573,511	+				-0.6
4,573,511	+				-0.2
4,573,511	+				+2.5
4,573,512	-				+1.1
4,573,512	-				+0.0
4,573,512	-				+0.1
4,573,512	-				+0.7
4,573,512	-				+0.5
4,573,512	-				+1.8
4,573,512	-				+0.8
4,573,515	+				+2.0
4,573,515	+				-1.4
4,573,515	+				+0.2
4,573,515	+				-0.6
4,573,516	-				+0.1
4,573,520	+				+1.6
4,573,540	+				-1.4
4,573,540	+				-0.5
4,573,540	+				+1.0
4,573,540	+				+0.8
4,573,541	-				-0.3
4,573,579	-				+0.0
4,573,589	-				-0.6
4,573,618	+				+0.9
4,573,660	+				-1.0
4,573,687	+				+1.1
4,573,793	+		PS417_21025	0.11	-0.4
4,573,818	+		PS417_21025	0.14	+1.7
4,574,022	+		PS417_21025	0.39	+0.9
4,574,064	+		PS417_21025	0.44	+1.0
4,574,064	+		PS417_21025	0.44	-0.7
4,574,064	+		PS417_21025	0.44	+0.8
4,574,064	+		PS417_21025	0.44	+0.6
4,574,064	+		PS417_21025	0.44	+1.2
4,574,064	+		PS417_21025	0.44	+0.3
4,574,066	+		PS417_21025	0.44	+0.8
4,574,066	+		PS417_21025	0.44	+1.9
4,574,193	+		PS417_21025	0.60	+1.0
4,574,193	+		PS417_21025	0.60	+0.4
4,574,194	-		PS417_21025	0.60	+2.9
4,574,229	+		PS417_21025	0.64	+1.6
4,574,510	+				+1.2
4,574,520	+				+1.7
4,574,520	+				-1.2
4,574,520	+				+0.2
4,574,577	-				-0.4
4,574,638	+				-0.7
4,574,640	+				+0.4
4,574,641	-				+0.2
4,574,724	-				-0.8
4,574,800	+		PS417_21030	0.11	-0.3
4,574,804	+		PS417_21030	0.12	-0.3
4,574,805	-		PS417_21030	0.12	-0.7
4,574,805	-		PS417_21030	0.12	+0.7
4,575,091	+		PS417_21030	0.32	-1.3
4,575,092	-		PS417_21030	0.32	-0.5
4,575,092	-		PS417_21030	0.32	+0.6
4,575,196	-				-0.2
4,575,196	-		PS417_21030	0.39	+0.2
4,575,316	+		PS417_21030	0.48	-0.8
4,575,467	+		PS417_21030	0.58	+0.2