Strain Fitness in Pseudomonas simiae WCS417 around PS417_20890

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
4,539,942	-		PS417_20885	0.50	+0.0
4,539,942	-		PS417_20885	0.50	+0.5
4,539,942	-		PS417_20885	0.50	-2.2
4,540,028	+		PS417_20885	0.56	-2.1
4,540,188	+		PS417_20885	0.67	+0.0
4,540,188	+		PS417_20885	0.67	+0.9
4,540,232	+		PS417_20885	0.70	+0.6
4,540,232	+		PS417_20885	0.70	-0.6
4,540,323	-		PS417_20885	0.76	+1.2
4,540,351	+		PS417_20885	0.78	+1.7
4,540,608	-				+0.1
4,540,608	-				+0.1
4,540,655	+				-2.4
4,540,656	-				-0.6
4,540,656	-				+0.1
4,540,656	-				-0.3
4,540,662	-				-0.0
4,540,789	-				-0.5
4,540,831	-				-0.0
4,540,891	-				+0.6
4,541,541	+		PS417_20890	0.37	-0.6
4,541,541	+		PS417_20890	0.37	-0.6
4,541,551	-		PS417_20890	0.37	+0.2
4,541,679	+		PS417_20890	0.43	-0.2
4,541,679	+		PS417_20890	0.43	-0.0
4,541,682	+		PS417_20890	0.43	-0.3
4,541,682	+		PS417_20890	0.43	-1.2
4,541,745	+		PS417_20890	0.45	+0.0
4,541,851	-		PS417_20890	0.50	-0.2
4,541,853	+		PS417_20890	0.50	-1.0
4,541,884	-		PS417_20890	0.51	-0.1
4,541,884	-		PS417_20890	0.51	+1.1
4,541,886	+		PS417_20890	0.51	-0.4
4,541,887	-		PS417_20890	0.51	-1.3
4,542,086	+		PS417_20890	0.60	-0.5
4,542,090	+		PS417_20890	0.60	-0.8
4,542,090	+		PS417_20890	0.60	-1.4
4,542,090	+		PS417_20890	0.60	-1.2
4,542,090	+		PS417_20890	0.60	+0.6
4,542,090	+		PS417_20890	0.60	-0.4
4,542,091	-		PS417_20890	0.60	-0.1
4,542,345	+		PS417_20890	0.70	-0.9
4,542,474	+		PS417_20890	0.76	+0.1
4,542,492	+		PS417_20890	0.77	+1.0
4,542,495	+		PS417_20890	0.77	-1.8
4,542,495	+		PS417_20890	0.77	-2.0
4,542,495	+		PS417_20890	0.77	-0.4
4,542,528	+		PS417_20890	0.78	-0.2
4,542,528	+		PS417_20890	0.78	-0.3
4,542,529	-		PS417_20890	0.78	-0.8
4,542,529	-		PS417_20890	0.78	-0.3
4,542,531	+		PS417_20890	0.78	-2.1
4,542,588	+		PS417_20890	0.81	+1.5
4,542,756	+		PS417_20890	0.88	-0.1
4,542,756	+		PS417_20890	0.88	+0.3
4,542,757	-		PS417_20890	0.88	-1.5
4,542,757	-		PS417_20890	0.88	-0.4
4,543,344	+		PS417_20895	0.20	-1.6
4,543,345	-		PS417_20895	0.20	+0.6
4,543,345	-		PS417_20895	0.20	-0.2
4,543,604	+		PS417_20895	0.51	+0.3
4,543,604	+				+1.8
4,543,604	+		PS417_20895	0.51	-0.2
4,543,604	+		PS417_20895	0.51	+0.4
4,543,604	+		PS417_20895	0.51	+0.9
4,543,604	+		PS417_20895	0.51	-0.5
4,543,604	+		PS417_20895	0.51	-0.7
4,543,605	-		PS417_20895	0.51	+1.4
4,543,605	-		PS417_20895	0.51	-0.9
4,543,605	-		PS417_20895	0.51	-0.0
4,543,605	-		PS417_20895	0.51	-0.5
4,543,605	-		PS417_20895	0.51	+0.3
4,543,605	-		PS417_20895	0.51	+0.4
4,543,605	-		PS417_20895	0.51	-0.5
4,543,605	-		PS417_20895	0.51	-0.3
4,543,605	-		PS417_20895	0.51	-1.4
4,543,605	-		PS417_20895	0.51	-2.3
4,543,605	-		PS417_20895	0.51	+0.8
4,543,605	-		PS417_20895	0.51	+0.3
4,543,605	-		PS417_20895	0.51	+0.2
4,543,605	-		PS417_20895	0.51	+0.7
4,543,606	+		PS417_20895	0.51	+0.5
4,543,606	+		PS417_20895	0.51	+0.5
4,543,607	-		PS417_20895	0.51	-1.4
4,543,607	-		PS417_20895	0.51	+0.3
4,543,677	+		PS417_20895	0.59	-0.0
4,543,932	+		PS417_20895	0.90	+0.6
4,543,932	+		PS417_20895	0.90	-0.9
4,543,932	+		PS417_20895	0.90	-1.4
4,543,932	+		PS417_20895	0.90	+0.4
4,543,933	-		PS417_20895	0.90	-0.5
4,543,935	-				+0.3