Strain Fitness in Pseudomonas simiae WCS417 around PS417_20790

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
4,515,416	+				-0.2
4,515,416	+				-0.1
4,515,417	-				-0.1
4,515,454	+				-0.9
4,515,454	+				-0.1
4,515,455	-				+0.5
4,515,455	-				+1.9
4,515,455	-				+0.3
4,515,458	+				+0.3
4,515,459	-				+0.1
4,515,459	-				+0.5
4,515,459	-				+1.3
4,515,459	-				+0.7
4,515,459	-				-0.5
4,515,459	-				-0.3
4,515,558	+				-0.6
4,515,558	+				-1.5
4,515,558	+				-2.3
4,515,558	+				-0.6
4,515,784	+		PS417_20785	0.27	+0.0
4,515,784	+		PS417_20785	0.27	-0.5
4,515,784	+		PS417_20785	0.27	+0.8
4,516,180	-		PS417_20785	0.81	+0.6
4,516,269	-				+0.2
4,516,363	+				+0.7
4,516,366	-				+2.2
4,516,486	+		PS417_20790	0.15	+2.9
4,516,487	-		PS417_20790	0.15	+3.6
4,516,487	-		PS417_20790	0.15	+3.1
4,516,487	-		PS417_20790	0.15	+1.6
4,516,547	+		PS417_20790	0.26	+2.3
4,516,547	+		PS417_20790	0.26	+2.6
4,516,548	-		PS417_20790	0.26	+2.6
4,516,619	+		PS417_20790	0.39	+2.4
4,516,620	-		PS417_20790	0.40	+0.2
4,517,018	+				+1.2
4,517,018	+				+0.8
4,517,018	+				-3.3
4,517,018	+				-0.3
4,517,155	-				-1.1
4,517,168	+				+0.6
4,517,198	+				+1.2
4,517,198	+				-1.2
4,517,199	-				+0.4
4,517,199	-				-0.7
4,517,231	+		PS417_20795	0.13	+0.4
4,517,231	+		PS417_20795	0.13	-0.4
4,517,232	-		PS417_20795	0.13	-2.3
4,517,647	-		PS417_20795	0.49	-0.2
4,517,726	+		PS417_20795	0.56	+0.2