Strain Fitness in Pseudomonas simiae WCS417 around PS417_19270

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
4,180,851	+		PS417_19265	0.67	+0.3
4,180,851	+		PS417_19265	0.67	-1.1
4,180,852	-				-0.4
4,180,852	-		PS417_19265	0.67	+0.4
4,180,950	+		PS417_19265	0.71	+0.1
4,180,951	-		PS417_19265	0.72	-1.3
4,181,311	-		PS417_19265	0.89	+0.6
4,181,311	-		PS417_19265	0.89	+6.0
4,181,466	+				+0.7
4,181,571	+				-0.2
4,181,571	+				-0.5
4,181,571	+				+0.8
4,181,583	+				+0.4
4,181,583	+				+2.5
4,181,629	+				+1.8
4,181,630	-				-1.3
4,181,764	+				+0.7
4,181,764	+				+1.3
4,181,765	-				-1.7
4,181,774	-				-2.2
4,181,825	+				+1.4
4,181,825	+				-0.1
4,181,907	+		PS417_19270	0.34	-1.5
4,181,962	-		PS417_19270	0.63	-0.3
4,181,962	-		PS417_19270	0.63	-1.0
4,182,044	+				-0.1
4,182,065	+				-0.6
4,182,065	+				+0.5
4,182,066	-				-0.7
4,182,066	-				-0.4
4,182,244	+		PS417_19275	0.27	-0.2
4,182,256	-		PS417_19275	0.29	+0.1
4,182,689	+				+0.3
4,182,689	+				+0.9
4,182,690	-				-0.1
4,182,690	-				+0.2
4,182,690	-				-0.3
4,182,690	-				+1.2
4,182,765	+				-1.1
4,182,781	-				+0.4
4,182,781	-				-1.2
4,182,784	+				+0.3
4,182,784	+				+0.8
4,182,785	-				-1.6
4,182,785	-				+1.5
4,182,785	-				-0.8
4,182,785	-				-1.1
4,182,785	-				-1.7
4,182,785	-				+1.5
4,182,812	-				+1.5
4,182,838	-				+0.1
4,182,838	-				-1.3
4,182,838	-				-1.0
4,182,839	+				-0.6
4,182,849	+				+0.4
4,182,849	+				+0.6
4,182,850	-				-0.5
4,182,850	-				-0.3
4,182,977	-		PS417_19280	0.26	+0.2
4,182,991	-		PS417_19280	0.28	-0.6