Strain Fitness in Pseudomonas simiae WCS417 around PS417_18435

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
4,010,628	-		PS417_18425	0.41	-0.8
4,010,844	+				+2.2
4,010,884	+				+4.7
4,010,943	-				-0.7
4,010,955	+				+6.3
4,010,955	+				+4.4
4,010,956	-				-1.3
4,010,975	+				+7.0
4,010,975	+				+8.1
4,010,975	+				+4.8
4,011,029	+				+4.7
4,011,029	+				+5.6
4,011,030	-				-3.3
4,011,034	+				+4.7
4,011,034	+				+5.5
4,011,035	-				-0.8
4,011,035	-				-0.7
4,011,035	-				-0.7
4,011,082	-				-3.3
4,011,104	-				+1.6
4,011,105	+				-3.4
4,011,105	+				-3.1
4,011,105	+				-1.5
4,011,106	-				-1.9
4,011,171	+		PS417_18430	0.37	-1.1
4,011,434	+				-1.1
4,011,434	+				-0.9
4,011,434	+				-0.8
4,011,435	-				-0.8
4,011,547	+		PS417_18435	0.18	-0.5
4,011,716	+				+1.3
4,011,717	-		PS417_18435	0.89	-0.3
4,011,773	+				-1.1
4,011,777	+				-0.2
4,011,777	+				-1.2
4,011,778	-				+0.3
4,011,797	+				-0.5
4,011,797	+				+0.6
4,011,797	+				-0.9
4,011,798	-				-2.8
4,011,798	-				-2.4
4,011,798	-				-1.0
4,011,798	-				+0.2
4,011,911	-		PS417_18440	0.24	-1.2
4,011,911	-		PS417_18440	0.24	-0.8
4,011,911	-		PS417_18440	0.24	-0.5
4,011,911	-				+2.6
4,011,915	+		PS417_18440	0.26	-0.6
4,011,915	+		PS417_18440	0.26	-0.4
4,011,916	-		PS417_18440	0.26	-1.2
4,012,174	+				-0.6
4,012,175	-				-1.0
4,012,200	+				-0.1
4,012,201	-				-2.1
4,012,207	-				-1.2
4,012,207	-				+0.2
4,012,216	+				+1.7
4,012,314	+		PS417_18445	0.24	-0.8
4,012,381	+		PS417_18445	0.34	-0.1
4,012,496	+		PS417_18445	0.51	-0.8