Strain Fitness in Pseudomonas simiae WCS417 around PS417_18420

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
4,008,836	+		PS417_18410	0.55	-0.9
4,008,837	-		PS417_18410	0.55	-1.1
4,008,900	+		PS417_18410	0.61	-1.1
4,008,901	-		PS417_18410	0.61	-0.9
4,008,991	-				-0.9
4,009,207	-		PS417_18410	0.89	-0.7
4,009,207	-		PS417_18410	0.89	-1.2
4,009,207	-		PS417_18410	0.89	-1.1
4,009,384	-				-0.7
4,009,458	+				-1.7
4,009,479	-				+1.0
4,009,711	+		PS417_18415	0.86	-0.9
4,009,764	+				+0.2
4,009,764	+				-1.8
4,009,879	+		PS417_18420	0.19	-0.2
4,009,894	+		PS417_18420	0.21	+10.1
4,009,894	+		PS417_18420	0.21	+1.0
4,009,895	-		PS417_18420	0.21	-0.7
4,010,258	-		PS417_18420	0.74	-1.6
4,010,258	-		PS417_18420	0.74	+0.2
4,010,312	+		PS417_18420	0.81	+0.3
4,010,313	-		PS417_18420	0.82	-1.7
4,010,628	-		PS417_18425	0.41	-0.8
4,010,844	+				+2.2
4,010,884	+				+4.7
4,010,943	-				-0.7
4,010,955	+				+6.3
4,010,955	+				+4.4
4,010,956	-				-1.3
4,010,975	+				+7.0
4,010,975	+				+8.1
4,010,975	+				+4.8
4,011,029	+				+4.7
4,011,029	+				+5.6
4,011,030	-				-3.3
4,011,034	+				+4.7
4,011,034	+				+5.5
4,011,035	-				-0.8
4,011,035	-				-0.7
4,011,035	-				-0.7
4,011,082	-				-3.3
4,011,104	-				+1.6
4,011,105	+				-3.4
4,011,105	+				-3.1
4,011,105	+				-1.5
4,011,106	-				-1.9
4,011,171	+		PS417_18430	0.37	-1.1
4,011,434	+				-1.1
4,011,434	+				-0.9
4,011,434	+				-0.8
4,011,435	-				-0.8