Strain Fitness in Pseudomonas simiae WCS417 around PS417_18175

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
3,957,918	-		PS417_18170	0.19	-0.3
3,958,011	+		PS417_18170	0.28	-0.1
3,958,011	+		PS417_18170	0.28	-0.1
3,958,012	-		PS417_18170	0.28	-0.4
3,958,014	+		PS417_18170	0.29	+0.4
3,958,015	-		PS417_18170	0.29	+0.6
3,958,015	-		PS417_18170	0.29	+1.2
3,958,244	+		PS417_18170	0.52	-0.3
3,958,244	+		PS417_18170	0.52	-1.4
3,958,245	-		PS417_18170	0.52	-1.3
3,958,245	-		PS417_18170	0.52	-0.5
3,958,360	-		PS417_18170	0.64	-0.7
3,958,360	-		PS417_18170	0.64	-0.1
3,958,486	-		PS417_18170	0.76	-0.1
3,958,519	-		PS417_18170	0.80	-0.2
3,958,519	-		PS417_18170	0.80	+0.1
3,958,644	-				-3.1
3,958,647	+				-0.9
3,958,663	+				-0.9
3,958,664	-				-1.7
3,958,930	+		PS417_18175	0.16	-0.9
3,958,930	+				+0.9
3,958,931	-		PS417_18175	0.16	+0.7
3,958,931	-		PS417_18175	0.16	-0.3
3,958,931	-		PS417_18175	0.16	+0.2
3,959,097	+		PS417_18175	0.30	+0.6
3,959,098	-		PS417_18175	0.31	-0.0
3,959,398	+		PS417_18175	0.56	-0.9
3,959,406	+		PS417_18175	0.57	-1.0
3,959,406	+		PS417_18175	0.57	-0.1
3,959,407	-		PS417_18175	0.57	-1.4
3,959,592	+		PS417_18175	0.72	-1.3
3,959,592	+		PS417_18175	0.72	-0.2
3,959,593	-		PS417_18175	0.72	-2.2
3,959,593	-		PS417_18175	0.72	-0.7
3,959,593	-				-1.0
3,959,640	-		PS417_18175	0.76	+0.2
3,959,960	-				+1.0
3,960,000	-				-1.0
3,960,029	+				+0.2
3,960,029	+				+0.3
3,960,030	-				-0.2
3,960,080	+				-1.0
3,960,547	-		PS417_18180	0.41	+0.1
3,960,633	-		PS417_18180	0.47	+0.9
3,960,633	-		PS417_18180	0.47	-0.5
3,960,876	-		PS417_18180	0.64	+0.6
3,960,876	-		PS417_18180	0.64	-0.8