Strain Fitness in Pseudomonas simiae WCS417 around PS417_16515

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
3,608,107	-				-0.4
3,608,107	-		PS417_16510	0.79	-2.2
3,608,169	-		PS417_16510	0.82	-1.7
3,608,169	-		PS417_16510	0.82	-1.1
3,608,373	+				-0.5
3,608,374	-				+0.3
3,608,577	+				-1.3
3,608,715	+		PS417_16515	0.29	-2.0
3,608,749	-		PS417_16515	0.38	-1.0
3,609,005	-				+4.4
3,609,078	+				-1.0
3,609,079	-				+2.1
3,609,088	-				+2.5
3,609,088	-				+1.7
3,609,128	+				-0.5
3,609,128	+				-0.0
3,609,162	+				-1.6
3,609,162	+				-1.0
3,609,163	-				-0.6
3,609,199	+				-0.7
3,609,200	-				+1.2
3,609,200	-				+2.0
3,609,302	+		PS417_16520	0.37	-0.2
3,609,302	+		PS417_16520	0.37	+0.9
3,609,303	-		PS417_16520	0.37	+0.2
3,609,457	-				-1.1
3,609,561	+				-0.2
3,609,562	-				+0.4
3,609,562	-				+0.3
3,609,565	+				-0.3
3,609,566	-				+0.7
3,609,566	-				-0.9
3,609,623	-				+1.0
3,609,639	+				+0.8
3,609,639	+				-0.2
3,609,639	+				+0.7
3,609,639	+				-1.1
3,609,640	-				-0.9
3,609,640	-				-0.1
3,609,640	-				-0.1
3,609,644	+				-1.8
3,609,644	+				-0.9
3,609,777	+		PS417_16525	0.17	-0.6
3,609,777	+		PS417_16525	0.17	-1.6
3,609,790	+		PS417_16525	0.18	-0.1
3,609,888	+		PS417_16525	0.26	-0.2
3,609,889	-		PS417_16525	0.26	+0.9
3,609,939	-		PS417_16525	0.30	+1.5
3,609,939	-		PS417_16525	0.30	+1.6
3,609,939	-		PS417_16525	0.30	-1.1