Strain Fitness in Pseudomonas simiae WCS417 around PS417_16380

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
3,584,314	+		PS417_16375	0.12	+0.5
3,584,433	+		PS417_16375	0.24	+1.5
3,584,433	+		PS417_16375	0.24	+0.7
3,584,497	-		PS417_16375	0.30	-0.3
3,584,569	-		PS417_16375	0.37	+0.3
3,584,715	+		PS417_16375	0.52	+0.3
3,584,976	+		PS417_16375	0.78	-0.4
3,584,976	+		PS417_16375	0.78	-2.1
3,584,976	+		PS417_16375	0.78	+2.2
3,584,976	+		PS417_16375	0.78	+1.1
3,585,201	+				-2.3
3,585,231	+				+0.8
3,585,231	+				+2.1
3,585,408	+		PS417_16380	0.34	+0.2
3,585,784	-		PS417_16385	0.22	-0.1
3,585,784	-		PS417_16385	0.22	+0.4
3,585,822	+		PS417_16385	0.31	-0.8
3,585,823	-		PS417_16385	0.31	-0.1
3,585,901	-		PS417_16385	0.51	-0.4
3,586,025	+		PS417_16385	0.81	-1.2
3,586,174	+				+0.4
3,586,175	-				-0.6
3,586,175	-				+0.6
3,586,176	+				-1.8
3,586,176	+				+0.2
3,586,176	+				-1.6
3,586,177	-				-1.7
3,586,309	+		PS417_16390	0.15	+0.8
3,586,309	+		PS417_16390	0.15	+1.0
3,586,310	-		PS417_16390	0.15	-0.2
3,586,334	+		PS417_16390	0.20	+0.6
3,586,334	+		PS417_16390	0.20	+0.3
3,586,334	+		PS417_16390	0.20	-0.1
3,586,334	+		PS417_16390	0.20	-0.3
3,586,335	-		PS417_16390	0.21	-0.6
3,586,335	-		PS417_16390	0.21	-0.5
3,586,480	+		PS417_16390	0.52	-0.9
3,586,562	+		PS417_16390	0.70	-0.3
3,586,604	-		PS417_16390	0.79	-1.0