Strain Fitness in Pseudomonas simiae WCS417 around PS417_16310

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
3,569,853	+				+2.3
3,569,856	+				-0.2
3,569,947	+		PS417_16295	0.28	+0.4
3,569,947	+		PS417_16295	0.28	+1.5
3,569,949	+		PS417_16295	0.28	+0.8
3,569,949	+		PS417_16295	0.28	-1.8
3,569,949	+		PS417_16295	0.28	-0.1
3,569,949	+		PS417_16295	0.28	-0.6
3,569,949	+		PS417_16295	0.28	-0.9
3,569,949	+		PS417_16295	0.28	+0.4
3,569,989	-		PS417_16295	0.40	+0.5
3,570,040	-				+0.7
3,570,040	-		PS417_16295	0.56	+1.0
3,570,063	-		PS417_16295	0.62	+0.3
3,570,181	-				-0.1
3,570,209	-				+0.3
3,570,312	-				-0.2
3,570,318	-				-1.8
3,570,365	-				-0.4
3,570,365	-				+0.0
3,570,383	-				-0.0
3,570,425	-				-1.1
3,570,484	+				+0.2
3,570,535	+				-1.1
3,570,535	+				+0.2
3,570,536	-				+0.1
3,570,845	-				+0.2
3,570,907	+		PS417_16310	0.12	-1.4
3,570,988	-		PS417_16310	0.24	+0.1
3,571,012	+		PS417_16310	0.27	-3.3
3,571,013	-		PS417_16310	0.27	-1.0
3,571,204	+				-0.3
3,571,405	-		PS417_16310	0.86	+0.8
3,571,408	+		PS417_16310	0.86	-0.7
3,571,409	-		PS417_16310	0.86	-1.2
3,571,409	-		PS417_16310	0.86	-2.6
3,571,432	+		PS417_16310	0.90	-1.3
3,571,432	+		PS417_16310	0.90	-2.4
3,571,432	+		PS417_16310	0.90	-1.4
3,571,433	-				-0.8
3,571,444	+				-0.0
3,571,564	+				-0.2
3,571,564	+				+0.5
3,571,565	-				-0.2
3,571,565	-				-0.6
3,571,568	-				+1.7