Strain Fitness in Pseudomonas simiae WCS417 around PS417_16240

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
3,557,424	+		PS417_16235	0.13	-0.0
3,557,432	+		PS417_16235	0.14	-1.0
3,557,432	+				-1.5
3,557,486	+		PS417_16235	0.19	-0.1
3,557,556	+		PS417_16235	0.25	+0.6
3,557,557	-		PS417_16235	0.25	+1.1
3,557,676	+		PS417_16235	0.36	+0.3
3,557,676	+		PS417_16235	0.36	-0.8
3,557,677	-		PS417_16235	0.36	+0.3
3,557,735	+		PS417_16235	0.41	+0.3
3,557,736	-		PS417_16235	0.41	+0.1
3,557,736	-		PS417_16235	0.41	-0.3
3,557,736	-		PS417_16235	0.41	+1.0
3,557,736	-		PS417_16235	0.41	+0.6
3,557,792	+		PS417_16235	0.47	-0.7
3,557,792	+		PS417_16235	0.47	+0.1
3,557,792	+		PS417_16235	0.47	+0.2
3,557,793	-		PS417_16235	0.47	-0.7
3,558,102	-		PS417_16235	0.75	+0.6
3,558,341	+				+1.0
3,558,342	-				-0.7
3,558,342	-				+0.4
3,558,342	-				-0.3
3,558,461	+				-0.0
3,558,463	+				-0.0
3,558,464	-				-1.7
3,558,811	+		PS417_16240	0.40	-0.2
3,558,910	+		PS417_16240	0.49	-0.9
3,558,910	+		PS417_16240	0.49	-0.2
3,558,910	+		PS417_16240	0.49	-1.2
3,558,911	-		PS417_16240	0.49	-2.9
3,558,911	-		PS417_16240	0.49	+0.6
3,558,979	+		PS417_16240	0.55	-0.9
3,559,487	+				+0.9
3,559,718	+				-2.9
3,559,918	-				+0.1
3,559,934	+		PS417_16245	0.11	-0.2
3,560,229	+		PS417_16245	0.27	+0.2
3,560,229	+				+0.2
3,560,230	-		PS417_16245	0.27	-2.7