Strain Fitness in Pseudomonas simiae WCS417 around PS417_15150

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
3,312,909	-		PS417_15140	0.50	+0.5
3,313,012	+		PS417_15140	0.59	+0.6
3,313,077	-		PS417_15140	0.65	+0.2
3,313,077	-		PS417_15140	0.65	+0.3
3,313,172	+		PS417_15140	0.73	-0.7
3,313,193	+		PS417_15140	0.75	-0.9
3,313,193	+		PS417_15140	0.75	+0.7
3,313,388	+				+0.7
3,313,409	+				+0.5
3,313,600	+		PS417_15145	0.42	+0.9
3,313,794	-				+0.5
3,314,130	+				-0.5
3,314,184	+				-1.2
3,314,188	+				-1.1
3,314,287	+				-0.1
3,314,520	+		PS417_15150	0.13	+0.5
3,314,521	-		PS417_15150	0.13	+0.1
3,314,641	-		PS417_15150	0.15	+0.0
3,314,725	-		PS417_15150	0.17	+1.0
3,314,973	+		PS417_15150	0.22	+0.3
3,315,342	+		PS417_15150	0.29	-0.4
3,315,343	-		PS417_15150	0.29	+1.0
3,315,393	+		PS417_15150	0.30	+0.1
3,315,394	-		PS417_15150	0.30	-2.0
3,315,660	-		PS417_15150	0.36	-0.2
3,315,660	-		PS417_15150	0.36	-1.0
3,315,837	+		PS417_15150	0.39	+0.3
3,315,837	+		PS417_15150	0.39	-0.4
3,315,837	+		PS417_15150	0.39	-0.6
3,315,837	+		PS417_15150	0.39	-0.0
3,315,838	-				-0.6
3,315,838	-		PS417_15150	0.39	+0.1
3,315,838	-		PS417_15150	0.39	+1.5
3,315,999	+		PS417_15150	0.43	+0.1
3,316,440	-		PS417_15150	0.52	-0.5
3,316,576	-		PS417_15150	0.54	+0.9
3,316,592	-		PS417_15150	0.55	-0.7
3,317,152	+		PS417_15150	0.66	-1.5
3,317,319	+		PS417_15150	0.70	-0.3
3,317,328	+		PS417_15150	0.70	+1.1
3,317,328	+		PS417_15150	0.70	-0.2
3,317,328	+		PS417_15150	0.70	+1.5
3,317,443	+		PS417_15150	0.72	-1.9
3,317,443	+		PS417_15150	0.72	-0.2
3,317,511	-		PS417_15150	0.73	+0.3
3,317,543	+		PS417_15150	0.74	+0.7
3,317,544	-		PS417_15150	0.74	+0.8
3,317,682	+		PS417_15150	0.77	-0.5
3,317,683	-		PS417_15150	0.77	-0.3
3,318,342	+				-0.4
3,318,386	-				+0.3
3,318,399	+				+0.4
3,318,399	+				-0.8
3,318,400	-				+0.7
3,318,400	-				+0.1
3,318,401	+				-2.0
3,318,435	+				-0.1
3,318,436	-				+0.2
3,318,534	+				-0.0
3,318,534	+				-1.0
3,318,651	-				+0.2
3,318,654	+				+0.3
3,318,654	+				-0.4
3,318,745	-				-0.2
3,318,749	-				+0.6
3,319,093	+		PS417_15155	0.10	-0.4
3,319,093	+		PS417_15155	0.10	-0.1
3,319,096	+		PS417_15155	0.10	-2.1
3,319,096	+		PS417_15155	0.10	+0.3
3,319,096	+		PS417_15155	0.10	-1.3
3,319,097	-		PS417_15155	0.10	-0.7
3,319,097	-		PS417_15155	0.10	+0.7
3,319,097	-		PS417_15155	0.10	+0.9
3,319,097	-		PS417_15155	0.10	+0.4
3,319,147	+		PS417_15155	0.12	+0.3
3,319,148	-		PS417_15155	0.12	+0.5
3,319,153	+		PS417_15155	0.13	+0.8
3,319,163	-		PS417_15155	0.13	-0.6
3,319,342	+		PS417_15155	0.20	+0.0
3,319,342	+		PS417_15155	0.20	-1.0
3,319,342	+		PS417_15155	0.20	+0.1
3,319,555	+		PS417_15155	0.29	-0.1
3,319,810	+		PS417_15155	0.40	+0.5