Strain Fitness in Pseudomonas simiae WCS417 around PS417_14680

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
3,205,662	-		PS417_14675	0.59	-1.1
3,205,662	-		PS417_14675	0.59	-3.0
3,205,789	+		PS417_14675	0.68	+0.0
3,205,805	-		PS417_14675	0.69	-1.6
3,205,895	+		PS417_14675	0.76	-2.4
3,205,895	+		PS417_14675	0.76	+0.1
3,205,968	+				+0.5
3,206,220	+				+0.6
3,206,220	+				-0.6
3,206,221	-				-0.1
3,206,221	-				-0.5
3,206,221	-				-0.4
3,206,325	-				-1.5
3,206,564	+		PS417_14680	0.22	+0.0
3,206,656	+		PS417_14680	0.32	-1.3
3,206,681	+		PS417_14680	0.35	-1.1
3,206,682	-				-0.9
3,206,850	-		PS417_14680	0.54	-1.6
3,206,850	-		PS417_14680	0.54	-0.0
3,207,108	+		PS417_14680	0.82	-0.0
3,207,185	+				+1.9
3,207,185	+				+0.1
3,207,185	+				-1.5
3,207,186	-				+0.7
3,207,574	+				-0.5
3,207,575	-				-0.0
3,207,610	+				-0.4
3,207,653	+				+0.7
3,207,697	-				+1.1
3,207,802	-				-0.3
3,207,854	-				+2.2
3,207,924	+				-2.0
3,207,925	-				+1.1
3,207,925	-				-2.0
3,207,925	-				-1.8
3,207,925	-				-0.2
3,207,928	+				-0.5
3,207,928	+				+1.9
3,207,929	-				-0.1
3,207,929	-				+0.2
3,207,971	+				-2.1
3,207,972	-				+0.1
3,207,972	-				-0.5
3,208,020	-				-0.3
3,208,077	-				+0.3
3,208,193	-		PS417_14690	0.13	+0.9
3,208,203	+		PS417_14690	0.14	+0.4