Strain Fitness in Pseudomonas simiae WCS417 around PS417_14470

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
3,159,895	+				-0.2
3,160,128	+		PS417_14465	0.57	+0.7
3,160,304	-				-0.2
3,160,315	-				+0.9
3,160,315	-				-0.2
3,160,433	+				-0.2
3,160,433	+				-0.1
3,160,433	+				+0.1
3,160,434	-				-0.6
3,160,520	+		PS417_14470	0.16	+0.1
3,160,520	+		PS417_14470	0.16	-0.6
3,160,521	-		PS417_14470	0.16	-1.5
3,160,521	-		PS417_14470	0.16	-1.0
3,160,521	-		PS417_14470	0.16	-0.2
3,160,523	-		PS417_14470	0.16	-0.9
3,160,523	-		PS417_14470	0.16	-0.1
3,160,695	-		PS417_14470	0.33	+0.0
3,160,700	+		PS417_14470	0.34	-1.5
3,160,701	-		PS417_14470	0.34	-0.8
3,160,916	+				-0.8
3,160,916	+				+2.2
3,160,917	-		PS417_14470	0.55	-0.3
3,160,958	+		PS417_14470	0.60	+0.6
3,160,973	+		PS417_14470	0.61	-0.9
3,160,973	+		PS417_14470	0.61	-0.8
3,160,973	+		PS417_14470	0.61	-1.0
3,160,974	-		PS417_14470	0.61	-0.3
3,160,974	-		PS417_14470	0.61	-0.7
3,160,977	-		PS417_14470	0.61	-2.3
3,161,000	+		PS417_14470	0.64	-0.1
3,161,001	-		PS417_14470	0.64	+0.3
3,161,001	-		PS417_14470	0.64	-0.8
3,161,021	+		PS417_14470	0.66	-0.2
3,161,021	+		PS417_14470	0.66	-0.2
3,161,021	+		PS417_14470	0.66	-1.3
3,161,021	+		PS417_14470	0.66	-1.6
3,161,051	-		PS417_14470	0.69	-0.3
3,161,081	+				+0.5
3,161,108	+		PS417_14470	0.75	-0.0
3,161,223	-		PS417_14470	0.86	-0.3
3,161,698	+		PS417_14475	0.32	-2.3
3,161,991	+		PS417_14475	0.63	+0.0
3,162,172	+		PS417_14475	0.82	+0.4
3,162,172	+		PS417_14475	0.82	-0.6
3,162,173	-		PS417_14475	0.82	+0.3
3,162,173	-		PS417_14475	0.82	+0.1
3,162,174	+		PS417_14475	0.82	-3.0
3,162,174	+		PS417_14475	0.82	+0.3