Strain Fitness in Pseudomonas simiae WCS417 around PS417_00140

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
29,001	+				+0.1
29,001	+				+1.6
29,002	-				-0.1
29,002	-				-0.2
29,002	-				+3.5
29,015	+				-0.3
29,015	+				-1.2
29,036	+				+0.3
29,090	-				-1.9
29,263	+				+1.9
29,264	-		PS417_00135	0.27	+0.8
29,265	+		PS417_00135	0.27	+1.1
29,266	-		PS417_00135	0.27	-0.4
29,486	-		PS417_00135	0.51	-2.0
29,514	+		PS417_00135	0.54	+0.0
29,542	-		PS417_00135	0.57	-0.5
29,583	-		PS417_00135	0.61	+2.2
29,583	-		PS417_00135	0.61	+0.8
29,583	-		PS417_00135	0.61	-1.4
29,586	+		PS417_00135	0.62	-0.1
29,671	-		PS417_00135	0.71	+0.3
29,671	-		PS417_00135	0.71	-0.1
29,779	-		PS417_00135	0.83	-1.1
29,855	+				-0.5
29,925	-				+0.1
29,952	+				-0.1
30,010	+				-1.1
30,024	+				+0.0
30,024	+				+1.0
30,025	-				+0.0
30,025	-				+1.2
30,025	-				+0.2
30,245	+		PS417_00140	0.19	-0.8
30,245	+		PS417_00140	0.19	-0.1
30,246	-		PS417_00140	0.19	+0.3
30,246	-		PS417_00140	0.19	-0.8
30,246	-		PS417_00140	0.19	+0.6
30,280	-		PS417_00140	0.22	-0.3
30,280	-		PS417_00140	0.22	-0.4
30,342	+		PS417_00140	0.26	+0.2
30,342	+		PS417_00140	0.26	+0.7
30,342	+		PS417_00140	0.26	-0.4
30,343	-		PS417_00140	0.26	+1.3
30,343	-		PS417_00140	0.26	-0.8
30,343	-		PS417_00140	0.26	+0.6
30,343	-		PS417_00140	0.26	-0.4
30,343	-		PS417_00140	0.26	-2.2
30,353	+		PS417_00140	0.27	-0.6
30,353	+		PS417_00140	0.27	-0.3
30,354	-		PS417_00140	0.27	-2.1
30,687	+		PS417_00140	0.49	-0.2
30,687	+		PS417_00140	0.49	-0.7
30,705	+		PS417_00140	0.50	+0.2
30,706	-		PS417_00140	0.50	-0.5
30,706	-		PS417_00140	0.50	-0.4
30,763	-		PS417_00140	0.54	-0.4
30,817	+		PS417_00140	0.57	-1.3
30,817	+				-0.4
30,827	+		PS417_00140	0.58	+0.4
30,827	+		PS417_00140	0.58	-0.2
30,827	+		PS417_00140	0.58	-1.5
30,827	+		PS417_00140	0.58	-0.5
30,828	-		PS417_00140	0.58	+0.7
30,828	-		PS417_00140	0.58	-0.8
30,828	-		PS417_00140	0.58	+0.1
30,874	-		PS417_00140	0.61	-0.1
30,952	-		PS417_00140	0.66	-0.1
30,952	-		PS417_00140	0.66	+0.4
30,952	-		PS417_00140	0.66	-0.8
31,105	-		PS417_00140	0.76	-1.0
31,206	+		PS417_00140	0.83	-1.1
31,206	+		PS417_00140	0.83	-0.9
31,215	+		PS417_00140	0.83	-0.1
31,215	+		PS417_00140	0.83	-0.6
31,215	+		PS417_00140	0.83	-0.6
31,216	-		PS417_00140	0.83	-1.3
31,216	-		PS417_00140	0.83	+0.2
31,216	-		PS417_00140	0.83	-0.5
31,216	-		PS417_00140	0.83	-0.2
31,329	+				-1.5
31,401	+				+0.0
31,402	-				+1.7
31,925	+		PS417_00145	0.37	+0.2
31,948	+		PS417_00145	0.40	+0.3
31,948	+		PS417_00145	0.40	-1.4
31,948	+		PS417_00145	0.40	+0.2
31,948	+		PS417_00145	0.40	+0.3
31,948	+		PS417_00145	0.40	-1.5
31,948	+		PS417_00145	0.40	-0.6
31,948	+		PS417_00145	0.40	+2.2
31,949	-		PS417_00145	0.40	+1.1
31,949	-		PS417_00145	0.40	+0.7
32,256	+		PS417_00145	0.72	-1.9
32,256	+		PS417_00145	0.72	-1.0
32,256	+		PS417_00145	0.72	+0.1
32,256	+		PS417_00145	0.72	-2.1
32,256	+		PS417_00145	0.72	+0.8
32,257	-		PS417_00145	0.72	-0.2
32,257	-		PS417_00145	0.72	+0.6
32,391	+		PS417_00145	0.86	+0.6
32,391	+		PS417_00145	0.86	-0.6
32,391	+		PS417_00145	0.86	+0.1
32,392	-		PS417_00145	0.87	+0.0