Strain Fitness in Pseudomonas simiae WCS417 around PS417_13040

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,849,119	-		PS417_13035	0.74	-0.7
2,849,119	-		PS417_13035	0.74	-0.2
2,849,134	-		PS417_13035	0.75	-1.8
2,849,161	+				+2.1
2,849,162	-		PS417_13035	0.76	+0.8
2,849,162	-		PS417_13035	0.76	-0.2
2,849,167	+		PS417_13035	0.76	+0.9
2,849,167	+				+0.9
2,849,168	-		PS417_13035	0.76	+0.8
2,849,168	-				-0.3
2,849,329	+		PS417_13035	0.80	+1.6
2,849,329	+		PS417_13035	0.80	-0.5
2,849,330	-		PS417_13035	0.80	+1.0
2,849,330	-		PS417_13035	0.80	+0.2
2,849,425	-				+0.1
2,849,503	-		PS417_13035	0.85	+0.3
2,849,503	-		PS417_13035	0.85	-0.3
2,849,506	+		PS417_13035	0.85	-1.7
2,849,507	-		PS417_13035	0.85	+0.8
2,849,507	-		PS417_13035	0.85	+0.2
2,849,507	-		PS417_13035	0.85	-0.4
2,849,618	-		PS417_13035	0.89	+1.7
2,849,927	-				-0.5
2,850,186	-		PS417_13040	0.19	+0.3
2,850,187	+		PS417_13040	0.20	+0.5
2,850,187	+		PS417_13040	0.20	-0.6
2,850,187	+		PS417_13040	0.20	+0.1
2,850,188	-		PS417_13040	0.20	+1.7
2,850,188	-		PS417_13040	0.20	+1.2
2,850,194	-		PS417_13040	0.21	-0.9
2,850,401	-		PS417_13040	0.53	-0.6
2,850,413	+		PS417_13040	0.54	+1.9
2,850,497	-		PS417_13040	0.67	-0.0
2,850,544	+		PS417_13040	0.75	-0.2
2,850,544	+		PS417_13040	0.75	+0.3
2,850,544	+		PS417_13040	0.75	-0.8
2,850,544	+		PS417_13040	0.75	+1.7
2,850,545	-		PS417_13040	0.75	-0.4
2,850,547	+		PS417_13040	0.75	-0.1
2,850,547	+		PS417_13040	0.75	-0.1
2,850,548	-		PS417_13040	0.75	-0.2
2,850,550	+		PS417_13040	0.76	+2.3
2,850,551	-		PS417_13040	0.76	+1.9
2,850,746	-				-0.2
2,850,746	-				+0.4
2,850,850	+				-1.1
2,850,854	+				+0.7
2,850,854	+				-0.3
2,850,854	+				-0.4
2,850,854	+				+0.3
2,850,855	-				-2.1
2,850,860	-				-1.0
2,850,874	+				+0.1
2,850,874	+				-0.1
2,851,197	+		PS417_13045	0.19	+0.0
2,851,197	+		PS417_13045	0.19	-2.8
2,851,198	-		PS417_13045	0.19	+0.0
2,851,549	+		PS417_13045	0.39	-0.2
2,851,549	+		PS417_13045	0.39	-2.0
2,851,551	+		PS417_13045	0.40	+0.3
2,851,630	+		PS417_13045	0.44	+0.2
2,851,676	-		PS417_13045	0.47	-0.0