Strain Fitness in Pseudomonas simiae WCS417 around PS417_12690

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,760,164	-		PS417_12685	0.68	-1.5
2,760,382	+				-0.3
2,760,382	+				-0.1
2,760,383	-				-0.7
2,760,383	-				+0.1
2,760,457	+				+1.4
2,760,457	+				-0.6
2,760,458	-				+0.7
2,760,458	-				+0.0
2,760,458	-				-0.1
2,760,458	-				-1.1
2,760,461	+				+0.4
2,760,461	+				-0.8
2,760,461	+				-2.1
2,760,462	-				+0.6
2,761,132	+		PS417_12690	0.44	+1.7
2,761,133	-		PS417_12690	0.44	+0.2
2,761,451	-		PS417_12690	0.66	-0.9
2,761,460	-		PS417_12690	0.67	-0.4
2,761,869	+				+0.1
2,761,870	-				-0.8
2,762,062	-				+0.3
2,762,095	-				-0.3
2,762,095	-				+0.5
2,762,098	+				+0.0
2,762,099	-				+0.3
2,762,099	-				+0.0
2,762,116	-				-1.7
2,762,116	-				-0.3
2,762,116	-				-1.1
2,762,308	+				-0.5
2,762,309	-				-0.1
2,762,341	+		PS417_12695	0.16	-3.2
2,762,578	+		PS417_12695	0.32	-3.5
2,762,590	+		PS417_12695	0.33	-2.5