Strain Fitness in Pseudomonas simiae WCS417 around PS417_12560

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,732,409	+		PS417_12555	0.74	-0.8
2,732,410	-		PS417_12555	0.74	-1.0
2,732,421	+				+0.5
2,732,422	-		PS417_12555	0.76	+0.1
2,732,422	-		PS417_12555	0.76	-0.6
2,732,510	+		PS417_12555	0.85	+1.9
2,732,510	+		PS417_12555	0.85	-0.9
2,732,511	-		PS417_12555	0.85	-0.9
2,732,511	-		PS417_12555	0.85	-2.2
2,732,511	-		PS417_12555	0.85	-0.9
2,732,637	+				-0.4
2,732,669	-				+0.5
2,732,799	+		PS417_12560	0.11	+1.0
2,732,969	+		PS417_12560	0.24	+2.1
2,732,969	+		PS417_12560	0.24	-0.8
2,733,002	+		PS417_12560	0.27	+1.0
2,733,003	-		PS417_12560	0.27	-1.4
2,733,003	-		PS417_12560	0.27	+1.0
2,733,003	-		PS417_12560	0.27	+0.7
2,733,003	-		PS417_12560	0.27	+0.4
2,733,119	+		PS417_12560	0.36	+2.2
2,733,399	+		PS417_12560	0.57	+2.7
2,733,435	+		PS417_12560	0.60	+1.4
2,733,436	-		PS417_12560	0.60	+0.5
2,733,436	-		PS417_12560	0.60	+0.2
2,733,470	+		PS417_12560	0.63	+1.7
2,733,478	+		PS417_12560	0.64	+0.5
2,733,479	-		PS417_12560	0.64	+1.4
2,733,572	+		PS417_12560	0.71	+1.3
2,733,572	+		PS417_12560	0.71	+1.6
2,733,641	+		PS417_12560	0.76	+2.1
2,733,734	+		PS417_12560	0.83	+2.3
2,733,885	-				+2.6
2,733,885	-				+2.1
2,733,911	+				+1.4
2,733,911	+				+1.7
2,733,912	-				+0.8
2,733,912	-				+1.3
2,733,988	-				-0.3
2,733,988	-				+1.2
2,734,094	-		PS417_12565	0.11	-0.1
2,734,286	+		PS417_12565	0.31	-0.2
2,734,287	-		PS417_12565	0.31	-1.6
2,734,935	+				+1.2
2,734,935	+				+1.8
2,734,935	+				+1.6
2,734,935	+				-0.9
2,734,936	-				+2.2
2,734,936	-				+0.8