Strain Fitness in Pseudomonas simiae WCS417 around PS417_12345

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,682,365	+				+0.4
2,682,366	-				+0.1
2,682,414	+				-0.2
2,682,417	+				-1.9
2,682,417	+				-1.5
2,682,418	-				+0.8
2,682,564	+				+0.5
2,682,565	-				-0.8
2,682,565	-				-0.2
2,682,565	-				-1.2
2,682,605	+				-0.1
2,682,605	+				+0.2
2,682,605	+				+1.5
2,682,605	+				-0.3
2,682,605	+				-0.2
2,682,605	+				+0.1
2,682,605	+				-0.6
2,682,605	+				-0.2
2,682,605	+				-0.5
2,682,605	+				-0.0
2,682,605	+				+0.7
2,682,605	+				-0.3
2,682,605	+				-0.1
2,682,606	-				-0.3
2,682,606	-				+0.2
2,682,606	-				-1.6
2,682,606	-				-0.9
2,682,609	+				-2.0
2,682,649	+				-0.1
2,682,744	-				-0.1
2,682,914	+				-0.6
2,682,918	+				+0.9
2,682,919	-				-0.2
2,682,956	-				+0.9
2,682,996	+				-0.3
2,682,996	+				-0.4
2,682,996	+				-1.0
2,682,997	-				+0.4
2,683,214	+				+1.3
2,683,310	+				-0.9
2,683,311	-				-1.5
2,683,550	+		PS417_12345	0.28	-0.9
2,683,550	+		PS417_12345	0.28	-2.4
2,683,594	+		PS417_12345	0.32	-1.2
2,684,529	+				-1.6
2,684,592	+				-0.4
2,684,695	+				-2.9
2,684,696	-		PS417_12350	0.10	+0.3
2,684,696	-		PS417_12350	0.10	-0.2
2,684,696	-		PS417_12350	0.10	-0.3
2,684,696	-		PS417_12350	0.10	-1.1
2,684,696	-		PS417_12350	0.10	-1.2
2,684,700	-		PS417_12350	0.10	-0.6
2,684,776	-		PS417_12350	0.12	-1.4
2,684,796	+		PS417_12350	0.13	-0.7
2,684,937	+		PS417_12350	0.16	-0.6