Strain Fitness in Pseudomonas simiae WCS417 around PS417_12205

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,650,721	-		PS417_12200	0.25	+1.6
2,650,721	-		PS417_12200	0.25	+1.3
2,650,721	-		PS417_12200	0.25	+1.3
2,650,779	-		PS417_12200	0.30	+1.4
2,651,112	-		PS417_12200	0.61	+1.3
2,651,112	-		PS417_12200	0.61	+1.0
2,651,277	-		PS417_12200	0.77	+1.7
2,651,277	-		PS417_12200	0.77	+0.4
2,651,331	-		PS417_12200	0.82	+1.4
2,651,519	+				+1.2
2,651,531	+				+1.6
2,651,585	-				-0.2
2,651,685	+				+1.0
2,651,706	-				-0.1
2,651,825	+		PS417_12205	0.16	+1.5
2,651,825	+		PS417_12205	0.16	+1.1
2,651,825	+		PS417_12205	0.16	+2.3
2,652,509	+		PS417_12205	0.53	-0.7
2,652,603	-		PS417_12205	0.59	+1.3
2,652,629	+		PS417_12205	0.60	+0.7
2,652,629	+		PS417_12205	0.60	+1.0
2,652,665	+		PS417_12205	0.62	+2.4
2,652,722	+		PS417_12205	0.65	+2.5
2,652,723	-		PS417_12205	0.65	+1.5
2,653,157	+		PS417_12205	0.89	+1.2
2,653,158	-		PS417_12205	0.89	+0.8
2,653,355	+				+0.4
2,653,355	+				+1.9
2,653,356	-				+1.4
2,653,356	-				+2.0
2,653,410	-				-0.1
2,653,463	-				-1.1
2,653,610	-		PS417_12210	0.14	-1.2
2,653,652	-		PS417_12210	0.16	+1.4
2,653,652	-		PS417_12210	0.16	-0.7
2,653,738	+		PS417_12210	0.21	+0.7
2,653,843	-				+1.4
2,653,992	-		PS417_12210	0.35	-1.2
2,654,090	-		PS417_12210	0.40	+0.2
2,654,108	-		PS417_12210	0.41	+2.3
2,654,329	+		PS417_12210	0.53	+0.7
2,654,330	-		PS417_12210	0.53	-0.1
2,654,330	-		PS417_12210	0.53	-1.4
2,654,330	-		PS417_12210	0.53	-0.7
2,654,330	-		PS417_12210	0.53	-1.2
2,654,330	-		PS417_12210	0.53	-0.7