Strain Fitness in Pseudomonas simiae WCS417 around PS417_11710

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,544,175	+		PS417_11705	0.52	-2.1
2,544,175	+		PS417_11705	0.52	-1.9
2,544,176	-		PS417_11705	0.52	-0.9
2,544,176	-		PS417_11705	0.52	-0.6
2,544,245	+		PS417_11705	0.56	-1.3
2,544,247	+		PS417_11705	0.57	-3.8
2,544,247	+		PS417_11705	0.57	-2.0
2,544,248	-		PS417_11705	0.57	-1.2
2,544,248	-		PS417_11705	0.57	-4.1
2,544,376	+		PS417_11705	0.64	-1.0
2,544,380	-		PS417_11705	0.65	-0.7
2,544,521	-		PS417_11705	0.73	-1.8
2,544,969	+				+1.1
2,544,970	-				+0.5
2,544,970	-				-3.5
2,544,970	-				-2.7
2,545,045	-				-0.0
2,545,049	-				-0.5
2,545,188	-				-1.8
2,545,188	-				-0.2
2,545,242	-				+0.7
2,545,343	+		PS417_11710	0.21	-1.3
2,545,343	+		PS417_11710	0.21	+0.4
2,545,343	+		PS417_11710	0.21	-0.3
2,545,344	-		PS417_11710	0.21	-0.7
2,545,344	-		PS417_11710	0.21	-0.9
2,545,721	+		PS417_11710	0.67	-0.8
2,545,722	-		PS417_11710	0.67	-2.3
2,545,832	+		PS417_11710	0.80	-0.9
2,545,833	-		PS417_11710	0.80	-1.3
2,545,833	-		PS417_11710	0.80	-0.2
2,545,995	-				+0.5
2,546,351	-				-0.2
2,546,355	-				-1.3
2,546,365	-				+0.7
2,546,369	-				-0.1
2,546,630	-				+0.1
2,546,633	+				+0.3
2,546,634	-				+0.2
2,546,634	-				+1.6
2,546,975	+				+0.0
2,546,996	-				-0.7