Strain Fitness in Pseudomonas simiae WCS417 around PS417_10965

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,347,373	+		PS417_10960	0.75	+1.9
2,347,373	+		PS417_10960	0.75	+0.4
2,347,373	+				-0.2
2,347,374	-		PS417_10960	0.75	-0.8
2,347,374	-				-0.1
2,347,374	-		PS417_10960	0.75	-0.1
2,347,554	+		PS417_10960	0.83	+0.4
2,347,554	+		PS417_10960	0.83	+0.3
2,347,554	+		PS417_10960	0.83	+0.4
2,347,555	-		PS417_10960	0.83	-0.6
2,347,604	+		PS417_10960	0.85	-0.2
2,347,839	-				+2.9
2,347,927	+				-0.1
2,347,930	+				-1.9
2,347,930	+				+0.0
2,347,931	-				+2.5
2,347,935	+				+0.4
2,348,033	-				-1.5
2,348,055	+				+1.6
2,348,055	+				-1.4
2,348,058	+				-0.4
2,348,058	+				+2.4
2,348,059	-				+2.1
2,348,059	-				-0.3
2,348,087	-				-0.2
2,348,198	-				+0.4
2,349,328	-				+0.5
2,349,338	+		PS417_10965	0.60	+0.2
2,349,338	+		PS417_10965	0.60	-0.4
2,349,338	+		PS417_10965	0.60	-1.1
2,349,399	-		PS417_10965	0.63	-0.7
2,349,399	-		PS417_10965	0.63	-1.1
2,349,399	-		PS417_10965	0.63	+0.2
2,349,601	+		PS417_10965	0.73	-0.3
2,349,601	+		PS417_10965	0.73	-0.2
2,349,602	-		PS417_10965	0.73	-1.9
2,349,602	-		PS417_10965	0.73	-0.5
2,349,642	-		PS417_10965	0.75	-0.6
2,349,714	-		PS417_10965	0.79	-0.0
2,349,835	-		PS417_10965	0.85	-0.7
2,349,878	+		PS417_10965	0.87	-1.2
2,349,879	-		PS417_10965	0.87	+0.1
2,349,926	+		PS417_10965	0.90	-0.1
2,349,927	-				-0.2
2,349,927	-		PS417_10965	0.90	-0.5
2,350,138	+				+0.2
2,350,167	+				-0.1
2,350,192	+				+0.2
2,350,216	+				-0.9
2,350,225	+				+0.7
2,350,226	-				-0.3
2,350,226	-				+0.1
2,350,507	+		PS417_10970	0.27	+0.1
2,350,508	-		PS417_10970	0.27	-0.6
2,350,524	+		PS417_10970	0.29	+0.2
2,350,524	+		PS417_10970	0.29	-0.0
2,350,524	+		PS417_10970	0.29	-0.4
2,350,530	+		PS417_10970	0.29	+0.4
2,350,530	+		PS417_10970	0.29	+0.7
2,350,530	+		PS417_10970	0.29	-0.4
2,350,530	+		PS417_10970	0.29	+0.0
2,350,531	-		PS417_10970	0.30	-0.3
2,350,647	+		PS417_10970	0.43	-0.3
2,350,647	+		PS417_10970	0.43	-1.1
2,350,739	-		PS417_10970	0.53	-0.2
2,350,800	+		PS417_10970	0.60	+0.3
2,351,031	+		PS417_10970	0.86	+0.8
2,351,031	+		PS417_10970	0.86	-0.5
2,351,120	-				-0.4