Strain Fitness in Pseudomonas simiae WCS417 around PS417_10685

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,281,208	-				-0.5
2,281,232	+				+0.4
2,281,232	+				+0.1
2,281,233	-				+0.2
2,281,474	-		PS417_10680	0.31	+0.7
2,281,735	+		PS417_10680	0.64	+0.1
2,281,736	-		PS417_10680	0.64	+1.7
2,281,809	-		PS417_10680	0.73	+0.3
2,282,017	-				-0.6
2,282,039	+				-0.1
2,282,040	-				-2.5
2,282,209	-		PS417_10685	0.14	+0.9
2,282,209	-		PS417_10685	0.14	+0.0
2,282,253	+		PS417_10685	0.18	-0.1
2,282,565	+		PS417_10685	0.45	+0.8
2,282,565	+		PS417_10685	0.45	-0.7
2,282,565	+		PS417_10685	0.45	-0.1
2,282,565	+		PS417_10685	0.45	+1.3
2,282,682	+		PS417_10685	0.55	+0.3
2,282,886	+		PS417_10685	0.72	+2.7
2,282,886	+		PS417_10685	0.72	-0.7
2,283,108	-				-0.6
2,283,168	-				-0.2
2,283,222	+				+0.1
2,283,222	+				+0.8
2,283,222	+				+0.2
2,283,223	-				-1.3
2,283,223	-				+0.3
2,283,223	-				+0.8
2,283,223	-				-1.3
2,283,223	-				-1.0
2,283,223	-				-0.0
2,283,414	-				-0.0
2,283,482	+		PS417_10690	0.12	+0.1
2,283,509	+		PS417_10690	0.14	-1.2
2,283,514	+		PS417_10690	0.14	-0.5
2,283,515	-		PS417_10690	0.14	-0.7
2,283,628	+		PS417_10690	0.19	-0.4
2,283,760	+				-1.0
2,283,760	+		PS417_10690	0.25	-2.5
2,283,761	-		PS417_10690	0.26	-0.2
2,283,761	-		PS417_10690	0.26	-0.7
2,283,761	-		PS417_10690	0.26	+1.1