Strain Fitness in Pseudomonas simiae WCS417 around PS417_10500

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,240,336	+				+0.2
2,240,336	+				+0.6
2,240,336	+				-1.1
2,240,336	+				-0.6
2,240,502	-		PS417_10495	0.18	-0.1
2,240,520	+		PS417_10495	0.21	+0.8
2,240,520	+		PS417_10495	0.21	-1.6
2,240,521	-		PS417_10495	0.21	-0.2
2,240,521	-				-0.5
2,240,647	+		PS417_10495	0.41	-0.9
2,240,754	+		PS417_10495	0.59	-0.2
2,240,755	-		PS417_10495	0.59	+0.9
2,240,755	-				+1.8
2,240,755	-		PS417_10495	0.59	-0.8
2,240,763	+		PS417_10495	0.60	-0.5
2,240,764	-		PS417_10495	0.60	-0.2
2,240,773	-		PS417_10495	0.62	-1.0
2,240,787	+		PS417_10495	0.64	+0.3
2,240,943	-		PS417_10495	0.89	-0.6
2,240,943	-		PS417_10495	0.89	-2.0
2,241,026	-				+0.4
2,241,100	-				+0.6
2,241,158	+				+0.1
2,241,158	+				+0.7
2,241,158	+				+1.2
2,241,327	-		PS417_10500	0.16	-0.5
2,241,327	-		PS417_10500	0.16	+1.4
2,241,327	-		PS417_10500	0.16	+0.1
2,241,504	+		PS417_10500	0.32	+0.4
2,241,545	+		PS417_10500	0.36	+0.4
2,241,546	-		PS417_10500	0.36	-0.2
2,241,632	-		PS417_10500	0.44	-0.1
2,241,632	-		PS417_10500	0.44	-0.6
2,241,724	+		PS417_10500	0.52	-0.5
2,241,772	+		PS417_10500	0.57	+0.2
2,241,776	+		PS417_10500	0.57	+0.2
2,241,776	+		PS417_10500	0.57	+0.7
2,241,776	+		PS417_10500	0.57	+0.2
2,241,776	+		PS417_10500	0.57	-1.0
2,241,776	+		PS417_10500	0.57	+0.1
2,241,777	-		PS417_10500	0.57	+0.4
2,241,777	-		PS417_10500	0.57	-2.7
2,241,777	-				+1.3
2,241,777	-		PS417_10500	0.57	-1.5
2,241,815	+		PS417_10500	0.61	+1.4
2,241,815	+		PS417_10500	0.61	-1.3
2,241,816	-		PS417_10500	0.61	-0.3
2,241,831	-		PS417_10500	0.62	+1.2
2,241,860	+		PS417_10500	0.65	-0.1
2,241,860	+		PS417_10500	0.65	-0.6
2,242,380	+		PS417_10505	0.16	+0.0
2,242,380	+		PS417_10505	0.16	-0.2
2,242,381	-		PS417_10505	0.16	-0.3
2,242,381	-		PS417_10505	0.16	-0.8
2,243,121	+				+1.5
2,243,204	+				+1.2
2,243,204	+				-1.7
2,243,204	+				-0.8
2,243,204	+				+0.1
2,243,205	-				+2.2
2,243,223	+				+0.2