Strain Fitness in Pseudomonas simiae WCS417 around PS417_09750

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,110,928	-		PS417_09745	0.10	-0.6
2,111,141	+		PS417_09745	0.33	-0.6
2,111,430	+		PS417_09745	0.63	-0.1
2,111,638	+		PS417_09745	0.85	-0.9
2,111,639	-		PS417_09745	0.85	-0.6
2,111,639	-		PS417_09745	0.85	+0.9
2,111,867	+				+1.0
2,111,868	-				-0.4
2,111,868	-				+0.2
2,111,903	+				+1.2
2,112,391	+		PS417_09750	0.21	+0.3
2,112,391	+		PS417_09750	0.21	+1.4
2,112,392	-		PS417_09750	0.21	+0.0
2,112,392	-		PS417_09750	0.21	+0.9
2,112,449	-				-0.6
2,112,903	+		PS417_09750	0.43	+0.3
2,112,904	-		PS417_09750	0.43	-1.0
2,112,907	-		PS417_09750	0.43	+1.1
2,113,027	-		PS417_09750	0.48	+0.8
2,113,071	+		PS417_09750	0.50	+1.1
2,113,072	-		PS417_09750	0.50	+1.1
2,113,075	-		PS417_09750	0.50	+0.6
2,113,075	-		PS417_09750	0.50	-1.3
2,113,097	+		PS417_09750	0.51	-0.8
2,113,146	+		PS417_09750	0.53	+1.2
2,113,146	+		PS417_09750	0.53	-1.2
2,113,147	-		PS417_09750	0.53	+0.6
2,113,147	-		PS417_09750	0.53	+1.2
2,113,147	-				-0.7
2,113,150	-		PS417_09750	0.53	+0.2
2,113,320	+		PS417_09750	0.60	+1.2
2,113,360	-		PS417_09750	0.62	-0.2
2,113,360	-		PS417_09750	0.62	+0.4
2,113,360	-		PS417_09750	0.62	+1.1
2,113,360	-		PS417_09750	0.62	+2.0
2,113,360	-		PS417_09750	0.62	+0.2
2,113,533	+		PS417_09750	0.69	+0.8
2,113,533	+		PS417_09750	0.69	+0.1
2,113,534	-		PS417_09750	0.69	+1.0
2,113,570	-				-0.9
2,113,596	+		PS417_09750	0.71	+0.1
2,113,669	-		PS417_09750	0.74	+1.1
2,113,669	-		PS417_09750	0.74	+0.3
2,113,686	+		PS417_09750	0.75	+0.4
2,113,687	-		PS417_09750	0.75	+1.1
2,113,687	-		PS417_09750	0.75	+0.4
2,113,725	+				+1.8
2,113,752	+		PS417_09750	0.78	+0.7
2,113,752	+		PS417_09750	0.78	+0.9
2,113,753	-		PS417_09750	0.78	+0.6
2,113,753	-		PS417_09750	0.78	-0.9
2,113,884	+		PS417_09750	0.83	-0.1
2,113,885	-		PS417_09750	0.83	-1.5
2,113,942	-		PS417_09750	0.86	-0.1
2,114,011	-		PS417_09750	0.89	-0.0
2,114,049	-				-0.2
2,114,052	+				-0.2
2,114,052	+				+0.4
2,114,052	+				+1.4
2,114,052	+				+0.8
2,114,052	+				-0.2
2,114,053	-				+0.4
2,114,053	-				+1.0
2,114,100	+				-1.0
2,114,101	-				-0.9
2,114,199	+				-0.0
2,114,200	-				-0.1
2,114,232	+				-0.4
2,114,232	+				-1.7
2,114,371	+				+0.4
2,114,375	+				+0.9
2,114,522	+				-0.1
2,114,522	+				+0.1
2,114,523	-				+0.6
2,114,523	-				-0.5
2,114,523	-				+1.6
2,114,523	-				-0.5
2,114,618	-				-1.9
2,114,757	-				+0.6
2,114,773	+				+1.7
2,114,807	+				-0.9
2,114,840	+		PS417_09755	0.11	-0.1
2,114,840	+		PS417_09755	0.11	-2.6
2,114,841	-		PS417_09755	0.11	+0.3
2,114,897	+		PS417_09755	0.21	+0.3
2,114,898	-		PS417_09755	0.22	-1.0
2,115,130	+		PS417_09755	0.65	-0.1
2,115,182	+		PS417_09755	0.75	+0.7
2,115,251	-		PS417_09755	0.88	-0.2
2,115,251	-		PS417_09755	0.88	+0.7
2,115,253	+		PS417_09755	0.88	-0.8
2,115,254	-		PS417_09755	0.88	-0.1
2,115,258	-				+1.8
2,115,258	-		PS417_09755	0.89	+0.3