Strain Fitness in Pseudomonas simiae WCS417 around PS417_09660

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,094,246	-				+1.8
2,094,368	-		PS417_09650	0.81	-2.7
2,094,388	+		PS417_09650	0.84	-0.6
2,094,709	+		PS417_09655	0.35	+0.0
2,094,898	+		PS417_09655	0.71	-0.1
2,094,899	-		PS417_09655	0.72	+0.1
2,095,132	+				-0.1
2,095,171	+				+0.5
2,095,172	-				+0.1
2,095,172	-				-0.4
2,095,172	-				-1.0
2,095,343	+		PS417_09660	0.22	+0.2
2,095,343	+				+2.1
2,095,452	+		PS417_09660	0.39	+2.4
2,095,453	-		PS417_09660	0.39	+1.0
2,095,453	-		PS417_09660	0.39	-0.4
2,095,559	+		PS417_09660	0.56	-1.6
2,095,559	+		PS417_09660	0.56	-0.3
2,095,560	-		PS417_09660	0.56	-1.9
2,095,560	-		PS417_09660	0.56	-0.7
2,095,615	+		PS417_09660	0.65	-0.3
2,095,687	+		PS417_09660	0.76	-0.3
2,095,687	+		PS417_09660	0.76	+0.5
2,095,687	+		PS417_09660	0.76	+1.1
2,095,687	+		PS417_09660	0.76	+0.9
2,095,929	-				-0.2
2,095,929	-				-2.3
2,095,939	+				-1.1
2,095,940	-				+0.1
2,096,015	+				-0.7
2,096,054	+				+0.1
2,096,145	+				+0.0
2,096,153	+				-0.5
2,096,154	-				+0.1
2,096,154	-				-0.2
2,096,154	-				-1.3
2,096,154	-				-0.2
2,096,521	+		PS417_09665	0.47	-0.2
2,096,709	+		PS417_09665	0.75	+3.2
2,096,710	-		PS417_09665	0.75	-1.0
2,096,710	-		PS417_09665	0.75	+0.0
2,096,710	-		PS417_09665	0.75	-0.1