Strain Fitness in Pseudomonas simiae WCS417 around PS417_08085

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,767,285	-		PS417_08080	0.16	+0.2
1,767,285	-		PS417_08080	0.16	-0.5
1,767,452	+		PS417_08080	0.34	+0.0
1,767,453	-		PS417_08080	0.34	-0.4
1,767,478	+		PS417_08080	0.36	-2.7
1,767,478	+		PS417_08080	0.36	-0.1
1,767,479	-		PS417_08080	0.36	+0.7
1,767,479	-		PS417_08080	0.36	+0.5
1,767,479	-		PS417_08080	0.36	-0.5
1,767,481	+		PS417_08080	0.37	-0.6
1,767,482	-		PS417_08080	0.37	+2.6
1,767,482	-		PS417_08080	0.37	-0.2
1,767,575	+		PS417_08080	0.46	-0.0
1,767,810	+		PS417_08080	0.70	-0.0
1,767,811	-		PS417_08080	0.70	+0.8
1,767,811	-		PS417_08080	0.70	+1.2
1,767,974	+		PS417_08080	0.87	-0.7
1,768,166	-				-0.0
1,768,216	-				+0.7
1,768,304	+		PS417_08085	0.11	-0.3
1,768,394	+		PS417_08085	0.17	-0.0
1,768,662	-		PS417_08085	0.35	-0.2
1,768,810	+		PS417_08085	0.45	-1.0
1,768,983	+		PS417_08085	0.56	-0.8
1,768,983	+				+0.5
1,768,984	-		PS417_08085	0.56	+0.7
1,768,984	-		PS417_08085	0.56	-0.8
1,768,984	-				+0.1
1,769,040	-		PS417_08085	0.60	+0.1
1,769,060	+		PS417_08085	0.61	-1.2
1,769,061	-		PS417_08085	0.61	-0.8
1,769,066	+		PS417_08085	0.62	+0.1
1,769,066	+		PS417_08085	0.62	-0.2
1,769,094	-		PS417_08085	0.64	+0.3
1,769,180	+		PS417_08085	0.69	-0.4
1,769,180	+		PS417_08085	0.69	-1.3
1,769,180	+		PS417_08085	0.69	+0.4
1,769,180	+		PS417_08085	0.69	+2.8
1,769,180	+		PS417_08085	0.69	+1.0
1,769,181	-		PS417_08085	0.69	-0.1
1,769,318	+		PS417_08085	0.78	+3.6
1,769,323	+		PS417_08085	0.79	-0.4
1,769,323	+		PS417_08085	0.79	-0.0
1,769,336	+		PS417_08085	0.80	+3.4
1,769,336	+		PS417_08085	0.80	+1.3
1,769,336	+		PS417_08085	0.80	+0.6
1,769,336	+		PS417_08085	0.80	-1.8
1,769,337	-		PS417_08085	0.80	+0.0
1,769,337	-		PS417_08085	0.80	+0.3
1,769,337	-		PS417_08085	0.80	-0.1
1,769,408	+		PS417_08085	0.84	-0.4
1,769,409	-		PS417_08085	0.84	-0.2
1,769,409	-		PS417_08085	0.84	-0.8
1,769,409	-		PS417_08085	0.84	+0.0
1,769,409	-		PS417_08085	0.84	-1.4
1,769,409	-				-0.3
1,769,495	+				+0.7
1,769,496	-				+1.0
1,769,496	-				-0.3
1,769,546	+				+0.3
1,769,546	+				-0.2
1,769,547	-				+0.5
1,769,547	-				-0.4
1,769,549	+				-0.4
1,769,550	-				-1.5
1,769,550	-				+0.1
1,769,558	+				-0.1
1,769,559	-				-0.4
1,769,631	+				+0.3
1,769,632	-				+0.1
1,769,632	-				-1.0
1,769,632	-				+0.3
1,769,632	-				-1.1
1,769,642	+				-0.3
1,769,642	+				+0.7
1,769,643	-				+0.1
1,769,643	-				+2.4
1,769,714	+				-0.8
1,769,714	+				+0.1
1,769,714	+				+0.1
1,769,714	+				-0.8
1,769,715	-				+0.6
1,769,715	-				+0.3
1,769,715	-				+0.6
1,769,715	-				-0.8
1,769,715	-				-0.8
1,769,761	+				+0.3
1,769,761	+				-0.4
1,769,837	+				-0.6
1,769,837	+				-0.0
1,770,362	+		PS417_08090	0.78	-0.5
1,770,513	-				-2.2
1,770,523	-				+0.4
1,770,527	-				-0.7
1,770,527	-				-0.0
1,770,550	+				-0.3
1,770,612	-				+0.6
1,770,621	+				-1.2
1,770,621	+				+0.5
1,770,621	+				+0.3
1,770,621	+				+0.0
1,770,622	-				-0.6
1,770,622	-				-0.5
1,770,622	-				-1.9
1,770,622	-				+0.3