Strain Fitness in Pseudomonas simiae WCS417 around PS417_06975

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,540,690	-				+1.5
1,540,809	+		PS417_06970	0.14	+2.8
1,540,810	-		PS417_06970	0.14	-0.6
1,541,289	+		PS417_06970	0.67	-0.7
1,541,289	+		PS417_06970	0.67	-0.5
1,541,570	+				-1.6
1,541,643	+				+1.3
1,541,643	+				+1.0
1,541,643	+				+1.9
1,541,661	+				-0.6
1,541,746	+				+0.7
1,541,746	+				-1.0
1,541,747	-				-1.2
1,541,747	-				-0.2
1,541,747	-				+1.2
1,541,747	-				+0.1
1,541,747	-				+0.4
1,541,947	+		PS417_06975	0.23	-1.4
1,542,031	+		PS417_06975	0.30	+0.0
1,542,032	-		PS417_06975	0.30	-0.1
1,542,082	+		PS417_06975	0.35	+2.0
1,542,083	-		PS417_06975	0.35	-1.3
1,542,083	-		PS417_06975	0.35	-0.1
1,542,298	+		PS417_06975	0.53	+0.5
1,542,298	+		PS417_06975	0.53	+0.8
1,542,299	-		PS417_06975	0.53	+0.3
1,542,299	-		PS417_06975	0.53	-0.3
1,542,299	-		PS417_06975	0.53	-0.4
1,542,306	-		PS417_06975	0.54	-0.9
1,542,343	-		PS417_06975	0.57	+1.0
1,542,407	+		PS417_06975	0.63	-0.6
1,542,407	+		PS417_06975	0.63	+0.2
1,542,407	+		PS417_06975	0.63	+0.3
1,542,407	+		PS417_06975	0.63	-0.8
1,542,407	+		PS417_06975	0.63	+0.2
1,542,407	+		PS417_06975	0.63	-1.3
1,542,408	-		PS417_06975	0.63	+2.0
1,542,408	-		PS417_06975	0.63	+1.4
1,542,408	-				-0.2
1,542,408	-		PS417_06975	0.63	-2.5
1,542,408	-		PS417_06975	0.63	+0.5
1,542,409	+		PS417_06975	0.63	-0.7
1,542,409	+		PS417_06975	0.63	-0.2
1,542,410	-		PS417_06975	0.63	+1.3
1,542,410	-		PS417_06975	0.63	+0.1
1,542,410	-		PS417_06975	0.63	+0.9
1,542,410	-		PS417_06975	0.63	+0.7
1,542,411	+		PS417_06975	0.63	+0.7
1,542,411	+		PS417_06975	0.63	-0.0
1,542,411	+		PS417_06975	0.63	-1.0
1,542,411	+		PS417_06975	0.63	+0.9
1,542,412	-		PS417_06975	0.63	+0.7
1,542,412	-		PS417_06975	0.63	+0.9
1,542,412	-		PS417_06975	0.63	+1.0
1,542,664	+		PS417_06975	0.85	-0.2
1,542,664	+		PS417_06975	0.85	+2.5
1,542,664	+		PS417_06975	0.85	-0.6
1,542,665	-		PS417_06975	0.85	-0.5
1,542,676	+		PS417_06975	0.86	+0.1
1,542,677	-		PS417_06975	0.86	-0.6
1,542,677	-		PS417_06975	0.86	+0.0
1,542,679	+		PS417_06975	0.86	-0.4
1,542,680	-		PS417_06975	0.86	+0.3
1,542,680	-		PS417_06975	0.86	+0.0
1,542,936	+				-0.7
1,542,936	+				-1.8
1,542,936	+				-1.0
1,542,936	+				-0.4
1,542,936	+				+1.0
1,542,937	-				+0.3
1,542,937	-				-1.1
1,542,944	-				-0.6
1,542,978	+		PS417_06980	0.12	-0.7
1,543,008	+		PS417_06980	0.14	-0.4
1,543,168	+		PS417_06980	0.28	+0.8
1,543,168	+		PS417_06980	0.28	-0.5
1,543,169	-		PS417_06980	0.28	-0.3
1,543,169	-		PS417_06980	0.28	+0.1
1,543,227	+		PS417_06980	0.33	+0.1
1,543,679	-		PS417_06980	0.71	-0.2
1,543,725	+		PS417_06980	0.75	+0.4
1,543,801	-		PS417_06980	0.81	-0.6