Strain Fitness in Pseudomonas simiae WCS417 around PS417_06800

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,505,648	+		PS417_06790	0.63	+1.4
1,505,808	+		PS417_06790	0.77	+1.0
1,506,083	-				+0.5
1,506,095	-				-0.1
1,506,372	+		PS417_06795	0.85	+0.5
1,506,394	-				+1.1
1,506,561	+				-0.1
1,506,562	-				-0.0
1,506,581	-				-1.0
1,506,581	-				-1.4
1,506,637	+		PS417_06800	0.11	+0.4
1,506,638	-		PS417_06800	0.11	-0.8
1,506,787	+		PS417_06800	0.36	-0.6
1,506,847	+		PS417_06800	0.47	-2.3
1,506,847	+		PS417_06800	0.47	-0.3
1,506,847	+		PS417_06800	0.47	+3.0
1,506,847	+		PS417_06800	0.47	+0.7
1,506,847	+		PS417_06800	0.47	-1.0
1,506,848	-		PS417_06800	0.47	+0.6
1,506,848	-		PS417_06800	0.47	+1.3
1,506,943	+		PS417_06800	0.63	+0.6
1,506,943	+		PS417_06800	0.63	+0.3
1,506,943	+		PS417_06800	0.63	+0.0
1,506,944	-		PS417_06800	0.63	+1.0
1,506,944	-		PS417_06800	0.63	-0.1
1,506,944	-		PS417_06800	0.63	-0.3
1,506,944	-		PS417_06800	0.63	-0.6
1,506,944	-				-0.1
1,506,946	-		PS417_06800	0.64	-0.1
1,507,075	+		PS417_06800	0.86	-0.4
1,507,075	+		PS417_06800	0.86	+2.1
1,507,075	+		PS417_06800	0.86	+0.3
1,507,076	-		PS417_06800	0.86	+0.1
1,507,156	+				+0.1
1,507,157	-				+0.5
1,507,157	-				+2.0
1,507,200	+				-0.1
1,507,200	+				-0.4
1,507,201	-				+0.2
1,507,201	-				+0.1
1,507,201	-				-0.3
1,507,201	-				-0.7
1,507,267	-				+0.2
1,507,436	+		PS417_06805	0.22	-0.1
1,507,475	-				+0.6
1,507,538	+		PS417_06805	0.34	-0.1
1,507,538	+		PS417_06805	0.34	-0.9
1,507,539	-		PS417_06805	0.35	+0.6
1,507,539	-		PS417_06805	0.35	-2.5
1,507,979	+				+1.9
1,507,980	-				+0.2
1,507,980	-				-0.2
1,508,013	-				-0.3
1,508,013	-				-1.0
1,508,085	-				+0.3
1,508,096	-				+1.1
1,508,096	-				-1.8