Strain Fitness in Pseudomonas simiae WCS417 around PS417_06785

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,502,907	-				-1.1
1,502,933	+				-0.6
1,503,012	+		PS417_06780	0.11	-0.1
1,503,085	-		PS417_06780	0.23	-2.2
1,503,284	+		PS417_06780	0.54	-1.0
1,503,447	+		PS417_06780	0.80	-1.3
1,503,447	+		PS417_06780	0.80	-0.7
1,503,448	-		PS417_06780	0.80	-1.5
1,503,448	-		PS417_06780	0.80	-1.9
1,503,660	+				-3.6
1,503,660	+				+0.6
1,503,660	+				-1.4
1,503,661	-				-1.7
1,503,661	-				-0.4
1,503,661	-				-0.1
1,503,662	+				-0.9
1,503,662	+				-0.1
1,503,663	-				-2.9
1,503,663	-				+0.3
1,503,664	+				-0.3
1,503,686	-				-0.3
1,503,698	-				-0.2
1,503,701	+				+1.2
1,503,738	+				-0.1
1,503,738	+				-1.3
1,503,770	+				-2.6
1,503,770	+				-0.6
1,503,771	-				-0.6
1,503,771	-				+0.2
1,503,771	-				+0.1
1,503,771	-				-0.9
1,503,776	+				-0.6
1,503,856	+				+1.6
1,504,040	-		PS417_06785	0.20	-0.4
1,504,147	+		PS417_06785	0.30	-0.6
1,504,147	+		PS417_06785	0.30	-1.8
1,504,148	-		PS417_06785	0.30	-0.4
1,504,351	+		PS417_06785	0.50	-0.7
1,504,556	-		PS417_06785	0.69	-0.4
1,504,692	+		PS417_06785	0.82	+0.0
1,504,756	+		PS417_06785	0.88	+0.0
1,504,756	+		PS417_06785	0.88	+0.7
1,504,759	+		PS417_06785	0.88	-0.6
1,504,759	+		PS417_06785	0.88	+0.2
1,504,961	-				-0.2
1,505,414	+		PS417_06790	0.43	+0.5
1,505,415	-		PS417_06790	0.43	-0.2
1,505,415	-		PS417_06790	0.43	+0.2
1,505,418	+		PS417_06790	0.43	+0.7
1,505,418	+		PS417_06790	0.43	-0.5
1,505,648	+		PS417_06790	0.63	+1.4
1,505,808	+		PS417_06790	0.77	+1.0