Strain Fitness in Pseudomonas simiae WCS417 around PS417_06495

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,438,192	+		PS417_06485	0.74	+0.4
1,438,199	+		PS417_06485	0.76	-1.6
1,438,200	-		PS417_06485	0.76	-3.2
1,438,200	-		PS417_06485	0.76	-0.3
1,438,200	-		PS417_06485	0.76	-0.2
1,438,252	+		PS417_06485	0.87	-0.2
1,438,307	+				-0.4
1,438,308	-				-0.2
1,438,329	-				+1.3
1,438,389	+		PS417_06490	0.14	-1.7
1,438,389	+		PS417_06490	0.14	-0.3
1,438,390	-		PS417_06490	0.14	-2.1
1,438,390	-		PS417_06490	0.14	-2.0
1,438,407	-		PS417_06490	0.18	-0.5
1,438,407	-		PS417_06490	0.18	+0.8
1,438,410	+		PS417_06490	0.18	-2.1
1,438,410	+		PS417_06490	0.18	-2.0
1,438,411	-		PS417_06490	0.19	-1.2
1,438,411	-		PS417_06490	0.19	-1.6
1,438,804	-				-0.5
1,439,053	-				+0.2
1,439,565	-		PS417_06495	0.80	+0.6
1,439,755	+				+2.5
1,439,867	+				+0.2
1,439,868	-				-0.3
1,439,868	-				+1.2
1,439,875	+				-0.3
1,439,875	+				-0.5
1,439,875	+				-0.2
1,439,875	+				+0.3
1,439,876	-				+0.1
1,439,876	-				+0.1
1,439,876	-				-1.1
1,439,876	-				+0.8
1,440,279	+		PS417_06500	0.55	+0.8
1,440,526	-		PS417_06500	0.87	+1.1