Strain Fitness in Pseudomonas simiae WCS417 around PS417_06430

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,424,411	+		PS417_06425	0.25	+1.2
1,424,514	-		PS417_06425	0.36	+0.7
1,424,515	+		PS417_06425	0.36	-0.9
1,424,515	+		PS417_06425	0.36	+0.6
1,424,516	-		PS417_06425	0.36	-0.4
1,424,531	+		PS417_06425	0.37	+0.5
1,424,531	+		PS417_06425	0.37	-1.7
1,424,531	+				+0.4
1,424,531	+		PS417_06425	0.37	+1.4
1,424,531	+		PS417_06425	0.37	-0.6
1,424,531	+		PS417_06425	0.37	+1.4
1,424,531	+		PS417_06425	0.37	+0.9
1,424,531	+		PS417_06425	0.37	-0.7
1,424,531	+		PS417_06425	0.37	-0.6
1,424,532	-		PS417_06425	0.38	-0.3
1,424,532	-		PS417_06425	0.38	+0.4
1,424,532	-		PS417_06425	0.38	-0.8
1,424,532	-		PS417_06425	0.38	-0.2
1,424,532	-		PS417_06425	0.38	-1.7
1,424,549	+		PS417_06425	0.39	-0.3
1,424,738	+		PS417_06425	0.58	-0.5
1,424,738	+		PS417_06425	0.58	-1.1
1,424,739	-		PS417_06425	0.58	-0.0
1,424,739	-		PS417_06425	0.58	-0.1
1,424,769	+		PS417_06425	0.61	-0.1
1,424,770	-		PS417_06425	0.61	+0.0
1,424,829	-		PS417_06425	0.67	-1.3
1,424,890	+		PS417_06425	0.73	-2.1
1,425,024	-		PS417_06425	0.86	-0.2
1,425,104	+				-2.0
1,425,190	+				+1.4
1,425,190	+				-0.3
1,425,191	-				+0.0
1,425,226	-				-0.3
1,425,226	-				+9.8
1,425,226	-				-0.1
1,425,273	+				+0.2
1,425,273	+				+0.0
1,425,273	+				+0.2
1,425,274	-				+0.2
1,425,274	-				+1.1
1,425,274	-				+0.7
1,425,319	+				-1.1
1,425,361	+				-0.3
1,425,361	+				+0.1
1,425,362	-				-0.9
1,425,793	+		PS417_06430	0.21	+0.1
1,426,675	+		PS417_06430	0.57	+1.3
1,426,675	+		PS417_06430	0.57	-0.4
1,426,843	+		PS417_06430	0.64	-0.1
1,426,843	+		PS417_06430	0.64	-2.0
1,426,844	-		PS417_06430	0.64	+3.2
1,426,844	-		PS417_06430	0.64	-0.9
1,426,902	-		PS417_06430	0.66	+0.2
1,427,227	+		PS417_06430	0.80	+4.2
1,427,253	+		PS417_06430	0.81	+0.5
1,427,279	-		PS417_06430	0.82	+0.2
1,427,299	+		PS417_06430	0.83	-2.1
1,427,300	-		PS417_06430	0.83	+0.3
1,427,300	-		PS417_06430	0.83	-2.6
1,427,300	-		PS417_06430	0.83	-0.3
1,427,300	-		PS417_06430	0.83	-0.2
1,427,339	+		PS417_06430	0.84	+0.2
1,427,340	-		PS417_06430	0.84	-0.1
1,427,342	-		PS417_06430	0.84	+0.7
1,427,342	-		PS417_06430	0.84	-2.1
1,427,763	-				-0.6
1,427,800	+				+3.2
1,427,801	-				+0.7
1,427,801	-				-2.2
1,427,801	-				-1.0
1,427,864	-				-0.7
1,427,972	-		PS417_06435	0.23	-0.6
1,427,972	-		PS417_06435	0.23	+0.1
1,428,050	-		PS417_06435	0.35	+0.1
1,428,073	+		PS417_06435	0.38	+0.2
1,428,073	+		PS417_06435	0.38	-0.3
1,428,074	-		PS417_06435	0.38	+1.9
1,428,199	-				+2.6
1,428,199	-		PS417_06435	0.58	-0.1
1,428,239	-		PS417_06435	0.64	-0.3
1,428,446	+				-2.2
1,428,454	+				-1.6
1,428,458	-				-0.4
1,428,458	-				-0.1
1,428,458	-				-1.7
1,428,510	+				+1.5
1,428,514	+				+0.2
1,428,515	-				+0.4
1,428,516	+				-1.3
1,428,516	+				+1.5
1,428,517	-				+0.1
1,428,517	-				-0.5
1,428,517	-				+0.7
1,428,517	-				-0.5
1,428,517	-				+0.9
1,428,520	+				-1.6
1,428,520	+				+0.2
1,428,520	+				+0.4
1,428,521	-				-0.5
1,428,521	-				+0.3
1,428,567	-				-0.1
1,428,567	-				+0.3
1,428,567	-				+2.0
1,428,577	+				+0.7
1,428,646	+				+1.9
1,428,700	+		PS417_06440	0.16	-1.2
1,428,700	+		PS417_06440	0.16	-0.7