Strain Fitness in Pseudomonas simiae WCS417 around PS417_06335

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,406,234	+		PS417_06330	0.12	-0.4
1,406,236	+		PS417_06330	0.12	+0.4
1,406,363	+				+0.4
1,406,480	+		PS417_06330	0.34	+0.8
1,406,504	+		PS417_06330	0.36	+0.1
1,406,570	-		PS417_06330	0.42	-0.1
1,407,274	+				+0.6
1,407,541	+		PS417_06335	0.38	+2.0
1,407,592	+		PS417_06335	0.44	-2.2
1,407,592	+				+2.2
1,407,593	-		PS417_06335	0.44	+0.5
1,407,593	-		PS417_06335	0.44	+5.2
1,407,593	-		PS417_06335	0.44	-0.1
1,407,989	-				-0.0
1,408,000	+				+0.7
1,408,001	-				-0.9
1,408,001	-				-0.7
1,408,815	+		PS417_06345	0.21	-0.2
1,408,815	+		PS417_06345	0.21	-0.1
1,408,816	-		PS417_06345	0.21	+0.5
1,408,816	-		PS417_06345	0.21	-1.5