Strain Fitness in Pseudomonas simiae WCS417 around PS417_06180

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,369,329	+		PS417_06175	0.36	+0.4
1,369,452	+		PS417_06175	0.46	-1.0
1,369,452	+		PS417_06175	0.46	+0.4
1,369,452	+		PS417_06175	0.46	-1.5
1,369,784	+		PS417_06175	0.74	+0.3
1,369,785	-		PS417_06175	0.74	+0.7
1,369,801	-		PS417_06175	0.75	-0.1
1,369,968	+		PS417_06175	0.89	-0.1
1,369,971	+		PS417_06175	0.89	-1.4
1,370,031	+				-0.9
1,370,032	-				-1.2
1,370,032	-				+2.2
1,370,117	+				-3.1
1,370,118	-				+2.2
1,370,118	-				-1.0
1,370,118	-				+1.1
1,370,167	+				-0.0
1,370,167	+				-0.7
1,370,167	+				-1.1
1,370,167	+				-0.5
1,370,168	-				-2.0
1,370,168	-				-1.2
1,371,236	-				+0.3
1,371,258	-				+4.4
1,371,258	-				+1.4
1,371,691	+				-0.6
1,371,691	+				+0.3
1,371,728	+				+0.0
1,371,728	+				-0.4
1,371,728	+				-1.3
1,371,728	+				-0.8
1,371,728	+				-0.4
1,371,728	+				-0.2
1,371,729	-				+3.3
1,371,729	-				+3.2
1,371,729	-				+4.4
1,371,729	-				+1.8
1,371,739	+				+0.4
1,371,740	-				+5.9
1,371,740	-				+2.6
1,371,809	+				+0.1
1,371,822	+				-0.2
1,371,952	+				-0.7
1,371,952	+				+1.1
1,371,953	-				+0.7
1,372,131	-		PS417_06190	0.20	+2.3