Strain Fitness in Pseudomonas simiae WCS417 around PS417_05765

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,288,197	+		PS417_05755	0.67	-0.8
1,288,197	+		PS417_05755	0.67	+1.2
1,288,198	-		PS417_05755	0.67	-1.5
1,288,270	-		PS417_05755	0.73	+0.5
1,288,432	-				-0.2
1,288,432	-		PS417_05755	0.87	+0.6
1,288,464	+		PS417_05755	0.89	-0.5
1,288,530	+				-1.3
1,288,531	-				+0.2
1,288,531	-				+1.1
1,288,592	-				-1.4
1,288,592	-				-0.1
1,288,871	+		PS417_05760	0.56	+0.5
1,288,872	-		PS417_05760	0.56	+0.5
1,288,872	-		PS417_05760	0.56	-1.5
1,288,880	+		PS417_05760	0.58	-1.4
1,288,881	-		PS417_05760	0.58	-0.3
1,288,976	+		PS417_05760	0.77	-1.3
1,288,976	+		PS417_05760	0.77	-0.2
1,288,976	+		PS417_05760	0.77	+2.8
1,288,976	+		PS417_05760	0.77	+0.0
1,289,019	+		PS417_05760	0.85	-2.7
1,289,020	-		PS417_05760	0.86	+0.5
1,289,020	-		PS417_05760	0.86	-1.7
1,289,020	-		PS417_05760	0.86	+1.4
1,289,123	+				-0.4
1,289,124	-				+1.1
1,289,124	-				-0.2
1,289,140	-				+0.1
1,289,235	+		PS417_05765	0.16	+1.7
1,289,235	+		PS417_05765	0.16	-0.0
1,289,235	+		PS417_05765	0.16	-0.1
1,289,238	+		PS417_05765	0.16	-3.2
1,289,239	-		PS417_05765	0.16	-0.1
1,289,361	+		PS417_05765	0.38	+1.3
1,289,362	-		PS417_05765	0.38	+0.7
1,289,379	+		PS417_05765	0.41	-0.4
1,289,380	-		PS417_05765	0.41	-0.3
1,289,380	-		PS417_05765	0.41	+0.1
1,289,383	+		PS417_05765	0.42	+0.7
1,289,383	+		PS417_05765	0.42	-0.2
1,289,383	+		PS417_05765	0.42	+2.1
1,289,384	-		PS417_05765	0.42	-0.3
1,289,384	-		PS417_05765	0.42	+0.7
1,289,837	+				-0.3
1,289,837	+				+0.2
1,289,838	-				-0.0
1,289,857	-				+0.8
1,289,860	+				-0.5
1,290,343	-		PS417_05775	0.34	+0.8
1,290,360	+		PS417_05775	0.35	+0.6
1,290,369	+		PS417_05775	0.36	-1.2