Strain Fitness in Pseudomonas simiae WCS417 around PS417_05640

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,266,866	+				-1.4
1,266,866	+				-0.4
1,266,988	-		PS417_05635	0.23	+0.7
1,267,062	-		PS417_05635	0.31	-0.4
1,267,079	-		PS417_05635	0.33	-1.4
1,267,099	+		PS417_05635	0.35	-0.1
1,267,100	-		PS417_05635	0.35	+0.7
1,267,100	-		PS417_05635	0.35	-0.4
1,267,179	+		PS417_05635	0.44	-0.2
1,267,248	+		PS417_05635	0.51	+0.1
1,267,406	+		PS417_05635	0.69	-0.7
1,267,689	+				-0.9
1,267,689	+				-1.6
1,267,690	-				+1.3
1,267,690	-				+0.3
1,267,720	+				-1.2
1,267,780	+				-0.8
1,267,903	-				-0.1
1,267,903	-				+1.3
1,269,036	+				+0.2
1,269,036	+				+0.2
1,269,037	-				-1.8
1,269,120	+				-1.1
1,269,262	-				-0.5
1,269,337	+				-0.3
1,269,436	+				+1.2
1,269,436	+				+2.2
1,269,437	-				-1.3
1,269,437	-				+0.6
1,269,437	-				+0.6
1,269,465	+				+0.3
1,269,465	+				-0.3
1,269,466	-				-2.1
1,269,543	+				-0.0
1,269,611	+				-0.9
1,269,635	-				-0.2
1,269,716	+				+0.8
1,269,815	-		PS417_05645	0.24	+0.1
1,269,854	+		PS417_05645	0.30	-1.5
1,269,854	+		PS417_05645	0.30	+0.6
1,269,873	-		PS417_05645	0.33	-2.4
1,270,035	+		PS417_05645	0.59	-0.6
1,270,035	+		PS417_05645	0.59	+0.5
1,270,036	-		PS417_05645	0.59	+3.1
1,270,036	-		PS417_05645	0.59	+0.3