Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03330 and PS417_03335 are separated by 185 nucleotides PS417_03335 and PS417_03340 are separated by 3 nucleotides
PS417_03330: PS417_03330 - Short chain fatty acid transporter, at 762,804 to 764,222
_03330
PS417_03335: PS417_03335 - MFS transporter, at 764,408 to 765,697
_03335
PS417_03340: PS417_03340 - gluconate transporter, at 765,701 to 767,071
_03340
Position (kb) 764
765
766 Strain fitness (log2 ratio) -1
0
1 at 763.768 kb on + strand, within PS417_03330 at 763.769 kb on - strand, within PS417_03330 at 763.987 kb on + strand, within PS417_03330 at 764.236 kb on + strand at 764.236 kb on + strand at 764.236 kb on + strand at 764.237 kb on - strand at 764.237 kb on - strand at 764.237 kb on - strand at 764.238 kb on + strand at 764.238 kb on + strand at 764.238 kb on + strand at 764.238 kb on + strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.245 kb on + strand at 764.257 kb on + strand at 764.332 kb on + strand at 764.333 kb on - strand at 764.333 kb on - strand at 764.333 kb on - strand at 764.335 kb on - strand at 764.335 kb on - strand at 764.744 kb on + strand, within PS417_03335 at 764.744 kb on + strand, within PS417_03335 at 764.916 kb on - strand, within PS417_03335 at 764.981 kb on + strand, within PS417_03335 at 764.982 kb on - strand, within PS417_03335 at 765.356 kb on + strand, within PS417_03335 at 765.356 kb on + strand, within PS417_03335 at 765.537 kb on - strand, within PS417_03335 at 765.537 kb on - strand, within PS417_03335 at 765.537 kb on - strand, within PS417_03335 at 765.565 kb on + strand, within PS417_03335 at 765.566 kb on - strand, within PS417_03335 at 765.655 kb on - strand at 765.655 kb on - strand at 765.757 kb on + strand at 765.757 kb on + strand at 765.758 kb on - strand at 765.758 kb on - strand at 766.017 kb on + strand, within PS417_03340 at 766.357 kb on + strand, within PS417_03340 at 766.425 kb on - strand, within PS417_03340
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X remove 763,768 + PS417_03330 0.68 +0.1 763,769 - PS417_03330 0.68 -1.2 763,987 + PS417_03330 0.83 -0.4 764,236 + +0.0 764,236 + -0.1 764,236 + +0.2 764,237 - -0.5 764,237 - +0.3 764,237 - -0.4 764,238 + -0.3 764,238 + +0.3 764,238 + -1.0 764,238 + -0.1 764,239 - +0.8 764,239 - +0.1 764,239 - -0.7 764,239 - -0.4 764,239 - +1.6 764,239 - +0.2 764,239 - -0.3 764,239 - +0.1 764,239 - -0.1 764,243 - -1.1 764,243 - -0.6 764,243 - +0.1 764,243 - +0.9 764,243 - +0.1 764,243 - -0.3 764,243 - +0.3 764,245 + -0.2 764,257 + +0.1 764,332 + +0.5 764,333 - -0.5 764,333 - +0.5 764,333 - +0.2 764,335 - -0.1 764,335 - +0.1 764,744 + PS417_03335 0.26 +0.1 764,744 + PS417_03335 0.26 -0.0 764,916 - PS417_03335 0.39 -0.3 764,981 + PS417_03335 0.44 +0.6 764,982 - PS417_03335 0.44 -0.9 765,356 + PS417_03335 0.73 +0.2 765,356 + PS417_03335 0.73 -0.2 765,537 - PS417_03335 0.88 +1.2 765,537 - PS417_03335 0.88 +1.2 765,537 - PS417_03335 0.88 +0.2 765,565 + PS417_03335 0.90 +0.4 765,566 - PS417_03335 0.90 +0.9 765,655 - -0.1 765,655 - -0.3 765,757 + +0.3 765,757 + -1.6 765,758 - +0.3 765,758 - +0.8 766,017 + PS417_03340 0.23 -0.7 766,357 + PS417_03340 0.48 +0.4 766,425 - PS417_03340 0.53 +0.0
Or see this region's nucleotide sequence