Strain Fitness in Pseudomonas simiae WCS417 around PS417_28030

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
6,048,456	+				+0.1
6,049,529	-		PS417_28030	0.20	-0.3
6,049,534	+		PS417_28030	0.21	+0.4
6,049,534	+		PS417_28030	0.21	-2.0
6,049,535	-		PS417_28030	0.21	-0.1
6,049,535	-		PS417_28030	0.21	-0.5
6,049,535	-		PS417_28030	0.21	+0.2
6,049,552	+		PS417_28030	0.26	-0.7
6,049,611	-		PS417_28030	0.41	-0.6
6,049,825	+				-0.6
6,049,825	+				+1.1
6,049,825	+				-1.6
6,049,825	+				+0.1
6,049,825	+				+0.2
6,049,826	-				+0.3
6,049,826	-				+0.1
6,049,826	-				+1.3
6,049,877	-				-0.4
6,049,893	-				-0.0
6,049,933	-				+0.7
6,049,945	+				-0.3
6,049,946	-				-0.3
6,050,069	+		PS417_28035	0.12	+0.6
6,050,294	+		PS417_28035	0.44	+0.0
6,050,294	+		PS417_28035	0.44	+1.6
6,050,295	-		PS417_28035	0.44	+0.4
6,050,295	-		PS417_28035	0.44	-0.7
6,050,510	+		PS417_28035	0.76	+0.1
6,050,555	+				+2.1
6,050,555	+		PS417_28035	0.82	-1.6
6,050,555	+		PS417_28035	0.82	+1.3
6,050,556	-		PS417_28035	0.82	-0.5
6,050,720	+				+0.2
6,050,721	-				-1.5
6,050,807	+				-0.8
6,050,810	+				+0.4