Strain Fitness in Pseudomonas simiae WCS417 around PS417_27490

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
5,931,942	+				+0.5
5,932,284	-				-0.0
5,932,289	+				+0.9
5,932,290	-				-1.4
5,932,290	-				-0.3
5,932,310	-				+0.0
5,932,326	-				+0.7
5,932,359	+				-1.6
5,932,359	+				+0.6
5,932,359	+				+0.2
5,932,359	+				+0.7
5,932,360	-				-1.3
5,932,360	-				+0.1
5,932,360	-				-0.0
5,932,396	+				+1.0
5,932,396	+				+0.5
5,932,396	+				+1.2
5,932,397	-				-0.1
5,932,571	+		PS417_27485	0.45	+0.7
5,932,572	-		PS417_27485	0.45	-0.7
5,932,581	-		PS417_27485	0.47	-0.3
5,932,581	-		PS417_27485	0.47	+0.3
5,932,826	-				-0.1
5,933,279	+		PS417_27490	0.69	+0.9
5,933,280	-		PS417_27490	0.70	+1.1
5,933,554	+				+0.4
5,933,555	-				+1.9
5,933,709	-		PS417_27495	0.56	+0.4
5,933,815	-				+0.1
5,933,815	-				+0.7
5,933,831	+				+0.6
5,933,831	+				+1.1
5,933,832	-				+0.2
5,933,832	-				+1.0
5,933,861	-				+1.2
5,933,889	+				+1.7
5,933,889	+				+0.6
5,933,889	+				+1.3
5,933,889	+				+1.2
5,933,892	+				+1.2
5,933,892	+				+0.7
5,933,892	+				+1.2
5,933,892	+				+1.9
5,933,893	-				+0.3
5,933,893	-				-0.4
5,933,976	-				+2.1
5,933,999	-				+0.9
5,933,999	-				+0.2
5,934,016	+				+0.2
5,934,233	-		PS417_27500	0.27	-1.4