Strain Fitness in Pseudomonas simiae WCS417 around PS417_26975

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
5,825,181	-				-0.7
5,826,006	-				-0.2
5,826,006	-				-2.1
5,826,006	-				-0.5
5,826,048	-				-0.7
5,826,059	-				-0.6
5,826,215	+		PS417_26975	0.19	-0.4
5,826,215	+		PS417_26975	0.19	-0.6
5,826,216	-		PS417_26975	0.19	-0.9
5,826,226	+		PS417_26975	0.20	-1.0
5,826,226	+		PS417_26975	0.20	-0.8
5,826,231	+		PS417_26975	0.21	-0.5
5,826,232	-		PS417_26975	0.21	-1.6
5,826,232	-		PS417_26975	0.21	-1.4
5,826,232	-		PS417_26975	0.21	-0.6
5,826,277	+		PS417_26975	0.26	-0.4
5,826,278	-		PS417_26975	0.27	-0.1
5,826,656	-		PS417_26975	0.75	+0.0
5,826,672	+		PS417_26975	0.77	-0.5
5,826,808	+				-0.6
5,826,836	+				+1.6
5,826,836	+				+0.5
5,826,837	-				+0.9
5,826,941	-				+0.7
5,827,048	+		PS417_26980	0.10	-0.5
5,827,100	-		PS417_26980	0.17	-1.1
5,827,265	-		PS417_26980	0.39	+0.1
5,827,297	+		PS417_26980	0.43	-0.0
5,827,345	+		PS417_26980	0.50	-0.9
5,827,345	+		PS417_26980	0.50	-0.4
5,827,345	+				+1.2
5,827,345	+		PS417_26980	0.50	-0.2
5,827,346	-		PS417_26980	0.50	-0.0
5,827,346	-		PS417_26980	0.50	-1.1
5,827,703	+				-0.1
5,827,704	-				+0.5
5,827,717	+				-0.1
5,827,736	+				+0.3
5,827,736	+				-0.4