Strain Fitness in Pseudomonas simiae WCS417 around PS417_25325

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
5,481,709	+				-0.5
5,481,893	+				+1.5
5,481,959	+		PS417_25320	0.28	+3.7
5,481,960	+		PS417_25320	0.29	+5.0
5,481,960	-		PS417_25320	0.29	+4.7
5,481,960	-		PS417_25320	0.29	+5.6
5,481,965	+		PS417_25320	0.29	+4.6
5,481,965	+		PS417_25320	0.29	+5.4
5,481,965	+				+5.3
5,481,965	+		PS417_25320	0.29	+5.0
5,481,966	-		PS417_25320	0.29	+5.1
5,482,256	+		PS417_25320	0.63	+5.8
5,482,257	-		PS417_25320	0.63	+5.1
5,482,412	+		PS417_25320	0.80	+4.1
5,482,413	-		PS417_25320	0.81	+5.3
5,482,581	+				+5.7
5,482,581	+				+4.1
5,482,581	+				-1.1
5,482,581	+				+5.1
5,482,581	+				+5.1
5,482,582	-				+5.0
5,482,582	-				+5.8
5,482,582	-				+5.2
5,482,582	-				+4.0
5,482,582	-				+5.4
5,482,582	-				+5.6
5,482,596	+				+4.0
5,482,597	-				+4.0
5,482,597	-				+0.7
5,482,632	+				+4.2
5,482,632	+				+5.0
5,482,635	+				+5.0
5,482,639	+				+6.2
5,482,639	+				+3.6
5,482,639	+				+5.0
5,482,639	+				+3.7
5,482,640	-				-0.1
5,482,640	-				-0.1
5,482,643	+				+3.5
5,482,672	+				+1.8
5,482,691	+				+0.6
5,482,691	+				+0.1
5,482,695	+				+0.7
5,482,695	+				-0.3
5,482,695	+				-0.8
5,482,695	+				+0.5
5,482,696	-				-1.0
5,482,696	-				+0.1
5,482,766	-				+0.1
5,482,942	+		PS417_25325	0.12	+0.3
5,483,342	+		PS417_25325	0.32	-0.6
5,483,343	-		PS417_25325	0.32	+0.7
5,483,639	+		PS417_25325	0.46	-0.1
5,483,680	+		PS417_25325	0.48	+0.0
5,483,681	-		PS417_25325	0.48	-0.8
5,483,869	+		PS417_25325	0.57	-0.2
5,484,133	+		PS417_25325	0.70	-0.4
5,484,264	+		PS417_25325	0.76	+0.7
5,484,265	-		PS417_25325	0.76	-0.3
5,484,293	-		PS417_25325	0.77	-0.5
5,484,411	-		PS417_25325	0.83	-0.9
5,484,604	-				-0.6
5,484,745	-				-1.1
5,484,756	+				-0.7
5,484,756	+				+0.1
5,484,846	-				-1.2
5,484,856	+				-1.5
5,484,857	-				-0.3
5,484,857	-				-1.7
5,484,897	+				-0.8
5,485,173	+		PS417_25330	0.30	-0.1
5,485,231	-		PS417_25330	0.37	-0.0
5,485,349	+		PS417_25330	0.53	+0.1
5,485,349	+		PS417_25330	0.53	-0.5
5,485,350	-		PS417_25330	0.53	-0.4
5,485,350	-		PS417_25330	0.53	+1.7
5,485,372	+		PS417_25330	0.56	-0.0
5,485,372	+		PS417_25330	0.56	-1.6
5,485,372	+		PS417_25330	0.56	+0.1
5,485,372	+		PS417_25330	0.56	-0.3
5,485,372	+		PS417_25330	0.56	-1.9
5,485,372	+		PS417_25330	0.56	-0.4
5,485,373	-		PS417_25330	0.56	-0.1
5,485,373	-		PS417_25330	0.56	-0.6
5,485,373	-		PS417_25330	0.56	+0.1
5,485,373	-		PS417_25330	0.56	-0.2
5,485,427	-		PS417_25330	0.63	-0.5
5,485,618	-		PS417_25330	0.87	-1.7
5,485,618	-		PS417_25330	0.87	-1.5
5,485,647	-				+0.9
5,485,647	-				+0.2
5,485,691	-				+0.1
5,485,714	+				-1.2
5,485,714	+				-0.0
5,485,715	-				-0.3
5,485,735	+				-0.2
5,485,735	+				+0.9
5,485,735	+				-0.5
5,485,735	+				-0.1
5,485,735	+				+0.1
5,485,736	-				+0.3
5,485,736	-				-0.5
5,485,736	-				-0.8
5,485,736	-				-0.3
5,485,736	-				-0.5